Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005175

Experiment: RCH2_defined_glucose_5mM with Adenine 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Adenine 4 mM
1,429,312	-		ABIE53_005174	0.33	-1.3
1,429,320	+		ABIE53_005174	0.33	+0.4
1,429,320	+		ABIE53_005174	0.33	-1.7
1,429,320	+		ABIE53_005174	0.33	+1.4
1,429,518	+		ABIE53_005174	0.48	-1.7
1,429,519	-		ABIE53_005174	0.48	-2.2
1,429,677	+		ABIE53_005174	0.60	+0.7
1,429,678	-		ABIE53_005174	0.60	+1.3
1,429,678	-		ABIE53_005174	0.60	+0.4
1,429,678	-		ABIE53_005174	0.60	-0.9
1,429,702	-		ABIE53_005174	0.62	-0.7
1,429,781	+		ABIE53_005174	0.68	-0.9
1,429,781	+		ABIE53_005174	0.68	-1.2
1,429,782	-		ABIE53_005174	0.68	-2.1
1,429,827	-		ABIE53_005174	0.71	-0.9
1,429,946	-		ABIE53_005174	0.80	-3.1
1,430,085	+				+0.5
1,430,085	+				+0.4
1,430,085	+				-0.6
1,430,086	-				-1.0
1,430,086	-				-0.8
1,430,086	-				-0.5
1,430,086	-				+0.7
1,430,086	-				+0.4
1,430,087	+				+2.0
1,430,087	+				-0.0
1,430,087	+				+0.7
1,430,088	-				-0.8
1,430,088	-				-0.8
1,430,088	-				+0.8
1,430,121	-				-0.1
1,430,121	-				-0.6
1,430,121	-				-1.2
1,430,136	+				+0.0
1,430,136	+				+0.2
1,430,136	+				-0.8
1,430,136	+				-0.2
1,430,136	+				+1.0
1,430,136	+				-0.3
1,430,136	+				+0.6
1,430,136	+				-0.1
1,430,136	+				+0.4
1,430,137	-				-0.6
1,430,137	-				-1.5
1,430,137	-				+0.3
1,430,137	-				-0.3
1,430,137	-				-0.7
1,430,137	-				+0.4
1,430,320	+				+0.8
1,430,320	+				-0.3
1,430,321	-				+1.0
1,430,321	-				-0.2
1,430,321	-				-1.8
1,430,321	-				+3.7
1,430,398	+		ABIE53_005175	0.14	-2.3
1,430,650	+		ABIE53_005175	0.46	+0.7
1,430,650	+		ABIE53_005175	0.46	-0.8
1,430,650	+		ABIE53_005175	0.46	-1.1
1,430,651	-		ABIE53_005175	0.46	+0.4
1,430,724	+		ABIE53_005175	0.56	+1.0
1,430,724	+		ABIE53_005175	0.56	+0.2
1,430,725	-		ABIE53_005175	0.56	-0.5
1,430,825	-		ABIE53_005175	0.68	+0.1
1,430,825	-		ABIE53_005175	0.68	-1.8
1,430,825	-		ABIE53_005175	0.68	-2.4
1,430,825	-		ABIE53_005175	0.68	+0.4
1,430,947	+		ABIE53_005175	0.84	-0.8
1,430,947	+		ABIE53_005175	0.84	+0.4
1,430,948	-		ABIE53_005175	0.84	-1.1
1,430,953	+		ABIE53_005175	0.85	-0.6
1,430,954	-		ABIE53_005175	0.85	-0.5
1,430,954	-		ABIE53_005175	0.85	-0.9
1,430,954	-		ABIE53_005175	0.85	-1.2
1,430,954	-		ABIE53_005175	0.85	-0.0
1,430,993	-		ABIE53_005175	0.90	-1.2
1,430,994	+				-2.4
1,431,055	+				-1.3
1,431,055	+				-0.6
1,431,130	+				+0.5
1,431,131	-				-1.7
1,431,510	+		ABIE53_005176	0.39	-1.4
1,431,510	+		ABIE53_005176	0.39	-0.9
1,431,510	+		ABIE53_005176	0.39	-1.9
1,431,510	+		ABIE53_005176	0.39	-0.2
1,431,612	+		ABIE53_005176	0.50	-0.7
1,431,613	-		ABIE53_005176	0.50	-0.5
1,431,613	-		ABIE53_005176	0.50	-0.2
1,431,716	+		ABIE53_005176	0.60	-1.6
1,432,007	+				+0.1
1,432,008	-				+0.3
1,432,008	-				-0.0