Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002394

Experiment: RCH2_defined_glucose_5mM with Adenine 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Adenine 4 mM
2,684,844	+				-0.6
2,684,869	+				+1.0
2,684,870	-				+1.7
2,684,870	-				+0.4
2,684,883	+				-1.2
2,684,884	-				+2.0
2,684,884	-				-1.7
2,684,884	-				-2.5
2,684,904	+				-1.2
2,684,904	+				+1.0
2,684,904	+				-1.5
2,684,904	+				-3.0
2,684,905	-				-0.3
2,684,905	-				-0.0
2,684,905	-				+0.4
2,684,905	-				-0.3
2,684,905	-				-0.0
2,684,905	-				-2.6
2,684,905	-				-2.2
2,684,905	-				-0.2
2,685,505	+		ABIE53_002393	0.74	-1.4
2,685,577	+		ABIE53_002393	0.83	-2.0
2,685,578	-		ABIE53_002393	0.83	+0.4
2,685,578	-		ABIE53_002393	0.83	+0.2
2,685,581	-		ABIE53_002393	0.83	+0.7
2,685,581	-		ABIE53_002393	0.83	+0.2
2,685,713	+				-2.3
2,685,772	-				-0.0
2,685,799	+				-0.8
2,685,800	-				+0.4
2,685,800	-				+3.0
2,685,946	+		ABIE53_002394	0.11	+0.3
2,685,970	+		ABIE53_002394	0.13	+0.5
2,686,033	+		ABIE53_002394	0.17	+1.3
2,686,161	-		ABIE53_002394	0.26	+0.4
2,686,353	-		ABIE53_002394	0.39	-0.8
2,686,480	+		ABIE53_002394	0.47	-0.7
2,686,537	+		ABIE53_002394	0.51	-1.9
2,686,538	-		ABIE53_002394	0.51	+2.0
2,686,594	+		ABIE53_002394	0.55	+0.1
2,686,595	-		ABIE53_002394	0.55	+0.3
2,686,692	+		ABIE53_002394	0.62	-2.0
2,686,742	+		ABIE53_002394	0.65	+2.0
2,686,769	-		ABIE53_002394	0.67	+0.4
2,686,829	-		ABIE53_002394	0.71	+0.6
2,686,829	-		ABIE53_002394	0.71	-0.6
2,686,844	-		ABIE53_002394	0.72	+1.5
2,687,062	+		ABIE53_002394	0.87	+0.3
2,687,062	+		ABIE53_002394	0.87	-1.6
2,687,062	+		ABIE53_002394	0.87	+2.8
2,687,063	-		ABIE53_002394	0.87	-0.8
2,687,110	+		ABIE53_002394	0.90	-0.3
2,687,110	+		ABIE53_002394	0.90	-0.0
2,687,110	+		ABIE53_002394	0.90	-1.6
2,687,111	-		ABIE53_002394	0.90	-0.8
2,687,155	+				-0.4
2,687,155	+				-1.5
2,687,155	+				-0.2
2,687,156	-				+0.7
2,687,157	+				-0.8
2,687,157	+				-0.6
2,687,215	+				+2.0
2,687,413	+				-0.2
2,687,421	+				-1.3
2,687,422	-				+0.5
2,687,478	+				-1.2
2,687,479	-				-1.2
2,687,561	-				+1.1
2,687,725	+		ABIE53_002395	0.12	+0.2
2,687,786	-		ABIE53_002395	0.19	+2.6
2,687,957	+		ABIE53_002395	0.39	+0.3
2,687,958	-		ABIE53_002395	0.39	-0.8
2,688,045	+		ABIE53_002395	0.49	-1.8