Experiment: MoYLS4 with Nickel Chloride 0.75mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0771 and DVU0772 are separated by 241 nucleotides DVU0772 and DVU0773 are separated by 275 nucleotides DVU0773 and atpC are separated by 126 nucleotides atpC and atpD are separated by 11 nucleotides
DVU0771: DVU0771 - molybdenum-pterin binding domain protein/site-specific recombinase, phage integrase family (TIGR), at 862,088 to 863,158
DVU0771
DVU0772: DVU0772 - hypothetical protein (TIGR), at 863,400 to 863,747
DVU0772
DVU0773: DVU0773 - hypothetical protein (TIGR), at 864,023 to 864,262
DVU0773
DVU0774: atpC - ATP synthase, F1 epsilon subunit (TIGR), at 864,389 to 864,793
atpC
DVU0775: atpD - ATP synthase, F1 beta subunit (TIGR), at 864,805 to 866,217
atpD
Position (kb) 864
865 Strain fitness (log2 ratio) -1
0
1
2 at 863.084 kb on - strand at 863.085 kb on + strand at 863.113 kb on - strand at 863.161 kb on - strand at 863.396 kb on + strand at 863.424 kb on - strand at 863.430 kb on + strand at 863.562 kb on + strand, within DVU0772 at 863.570 kb on - strand, within DVU0772 at 863.590 kb on - strand, within DVU0772 at 863.640 kb on - strand, within DVU0772 at 863.740 kb on - strand at 863.832 kb on - strand at 863.832 kb on - strand at 863.832 kb on - strand at 863.929 kb on - strand at 863.957 kb on + strand at 863.965 kb on - strand at 863.965 kb on - strand at 863.965 kb on - strand at 863.965 kb on - strand at 863.965 kb on - strand at 863.998 kb on + strand at 863.998 kb on + strand at 864.219 kb on + strand, within DVU0773 at 864.252 kb on + strand at 864.341 kb on - strand at 864.380 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Nickel Chloride 0.75mM remove 863,084 - +0.4 863,085 + -0.8 863,113 - -0.6 863,161 - -0.5 863,396 + -1.0 863,424 - -0.1 863,430 + -0.1 863,562 + DVU0772 0.47 -0.8 863,570 - DVU0772 0.49 -1.1 863,590 - DVU0772 0.55 +0.2 863,640 - DVU0772 0.69 -0.5 863,740 - -1.2 863,832 - +1.4 863,832 - -1.3 863,832 - +2.1 863,929 - -0.4 863,957 + +0.6 863,965 - +0.4 863,965 - -1.1 863,965 - -0.5 863,965 - +0.2 863,965 - +0.1 863,998 + -0.1 863,998 + +0.4 864,219 + DVU0773 0.82 +0.1 864,252 + +0.6 864,341 - -0.2 864,380 + +2.4
Or see this region's nucleotide sequence