Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS16685

Experiment: Recovery broth with Hygromycin B 0.2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Recovery broth with Hygromycin B 0.2 mM
1,513,431	-				+1.0
1,513,432	+				+0.2
1,513,438	-				+0.7
1,513,449	+				+0.3
1,513,450	-				-0.2
1,513,485	+				+0.2
1,513,527	+		BBR_RS16680	0.14	+0.5
1,513,527	-		BBR_RS16680	0.14	-1.2
1,513,533	+		BBR_RS16680	0.15	+1.2
1,513,533	+		BBR_RS16680	0.15	-0.2
1,513,535	-		BBR_RS16680	0.15	+0.6
1,513,541	-		BBR_RS16680	0.16	+0.6
1,513,541	-		BBR_RS16680	0.16	-0.8
1,513,544	+		BBR_RS16680	0.16	+0.7
1,513,544	+		BBR_RS16680	0.16	+0.1
1,513,583	-		BBR_RS16680	0.20	+0.3
1,513,583	-		BBR_RS16680	0.20	+0.9
1,513,648	-		BBR_RS16680	0.27	+0.1
1,513,686	-		BBR_RS16680	0.30	-0.3
1,513,686	-		BBR_RS16680	0.30	-2.8
1,513,717	+		BBR_RS16680	0.34	-0.2
1,513,717	+		BBR_RS16680	0.34	-1.2
1,513,733	-		BBR_RS16680	0.35	+0.0
1,513,733	-		BBR_RS16680	0.35	-0.0
1,513,773	+		BBR_RS16680	0.39	+0.1
1,513,878	+		BBR_RS16680	0.50	+0.3
1,513,894	+		BBR_RS16680	0.52	-0.2
1,513,895	-		BBR_RS16680	0.52	-0.0
1,513,902	-		BBR_RS16680	0.52	+0.8
1,513,905	-		BBR_RS16680	0.53	-0.3
1,513,905	-		BBR_RS16680	0.53	-0.4
1,513,929	-		BBR_RS16680	0.55	-1.8
1,513,995	+		BBR_RS16680	0.62	+0.3
1,514,022	-		BBR_RS16680	0.65	-0.3
1,514,022	-		BBR_RS16680	0.65	-1.3
1,514,022	-		BBR_RS16680	0.65	-0.6
1,514,072	+		BBR_RS16680	0.70	-0.3
1,514,117	+		BBR_RS16680	0.74	+0.2
1,514,125	-		BBR_RS16680	0.75	+0.2
1,514,125	-		BBR_RS16680	0.75	+0.4
1,514,152	-		BBR_RS16680	0.78	-0.5
1,514,152	-		BBR_RS16680	0.78	+0.5
1,514,175	-		BBR_RS16680	0.80	+0.3
1,514,176	-		BBR_RS16680	0.80	-0.3
1,514,213	-		BBR_RS16680	0.84	+0.6
1,514,213	-		BBR_RS16680	0.84	-0.6
1,514,273	-				+0.3
1,514,371	+				+0.4
1,514,439	+				+0.1
1,514,452	-				+0.3
1,514,454	+				+0.3
1,514,480	+		BBR_RS16685	0.12	-1.8
1,514,485	+		BBR_RS16685	0.13	-1.8
1,514,825	-				-0.5
1,514,861	-				+0.7
1,514,889	-				+0.0
1,514,895	-				+0.9
1,514,919	+				+1.3
1,514,923	-				-1.7
1,514,927	-				-0.1
1,514,972	-				-0.1
1,515,009	-				+0.6