Strain Fitness in Bifidobacterium breve UCC2003 around BBR_RS15055

Experiment: Recovery broth with Hygromycin B 0.2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Recovery broth with Hygromycin B 0.2 mM
1,145,115	+		BBR_RS15045	0.37	+0.5
1,145,155	+		BBR_RS15045	0.43	+0.2
1,145,155	-		BBR_RS15045	0.43	+0.4
1,145,171	+		BBR_RS15045	0.45	+0.6
1,145,171	+		BBR_RS15045	0.45	+0.7
1,145,171	+		BBR_RS15045	0.45	+1.8
1,145,171	+		BBR_RS15045	0.45	+0.1
1,145,192	-		BBR_RS15045	0.48	+0.2
1,145,200	+		BBR_RS15045	0.49	-0.5
1,145,207	+		BBR_RS15045	0.51	+0.2
1,145,336	-		BBR_RS15045	0.70	-0.2
1,145,365	+		BBR_RS15045	0.74	-0.1
1,145,407	+		BBR_RS15045	0.80	+0.0
1,145,434	+		BBR_RS15045	0.84	-0.4
1,145,434	+		BBR_RS15045	0.84	+0.1
1,145,434	+		BBR_RS15045	0.84	-1.1
1,145,434	+		BBR_RS15045	0.84	-0.9
1,145,434	+		BBR_RS15045	0.84	-1.4
1,145,442	-		BBR_RS15045	0.85	+0.2
1,145,457	+		BBR_RS15045	0.88	+0.3
1,145,464	-		BBR_RS15045	0.89	-1.1
1,145,481	-				+0.9
1,145,483	-				+1.3
1,145,483	-				-0.6
1,145,492	+				-0.7
1,145,548	-				+0.3
1,145,567	+				-0.2
1,145,585	+				+0.1
1,145,588	-				-1.1
1,145,588	-				+0.6
1,145,588	-				+1.5
1,145,599	+				-0.7
1,145,750	+		BBR_RS15050	0.31	-1.9
1,145,771	+		BBR_RS15050	0.37	-0.5
1,145,938	+		BBR_RS15050	0.78	-1.9
1,145,953	+		BBR_RS15050	0.81	-0.0
1,146,038	+				-1.5
1,146,052	+		BBR_RS15055	0.11	-1.2
1,146,085	+		BBR_RS15055	0.24	+0.9
1,146,090	+		BBR_RS15055	0.27	+0.2
1,146,183	+		BBR_RS15055	0.66	-2.3
1,146,218	+		BBR_RS15055	0.81	-1.7
1,146,239	+		BBR_RS15055	0.89	-2.6
1,146,274	+				-0.2