Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002076

Experiment: RCH2_defined_glucose_5mM with Adenine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Adenine 5 mM
2,323,646	+		ABIE53_002074	0.69	-0.1
2,323,705	+		ABIE53_002074	0.75	-1.0
2,323,705	+		ABIE53_002074	0.75	-0.4
2,323,705	+		ABIE53_002074	0.75	+2.9
2,323,705	+		ABIE53_002074	0.75	-2.4
2,323,705	+		ABIE53_002074	0.75	-0.4
2,323,706	-		ABIE53_002074	0.75	-1.8
2,323,780	+		ABIE53_002074	0.84	-2.1
2,323,781	-		ABIE53_002074	0.84	+0.9
2,323,781	-		ABIE53_002074	0.84	-1.7
2,323,796	+		ABIE53_002074	0.85	+0.9
2,323,859	+				-2.4
2,323,859	+				-0.9
2,323,859	+				-1.9
2,323,859	+				-0.1
2,323,860	-				-0.8
2,323,860	-				+0.3
2,323,860	-				-1.8
2,323,861	+				-0.4
2,323,862	-				-1.1
2,324,026	+				-1.6
2,324,027	-				+1.9
2,324,027	-				-1.1
2,324,046	-				+0.1
2,324,046	-				-1.6
2,324,061	+				-0.7
2,324,061	+				+3.3
2,324,085	-				+0.1
2,324,140	+				-2.5
2,324,140	+				+0.9
2,324,140	+				-0.1
2,324,141	-				+0.4
2,324,141	-				-1.0
2,324,141	-				-0.4
2,324,310	+		ABIE53_002075	0.38	+3.5
2,324,310	+		ABIE53_002075	0.38	-0.4
2,324,310	+		ABIE53_002075	0.38	-0.9
2,324,311	-		ABIE53_002075	0.39	+1.1
2,324,311	-		ABIE53_002075	0.39	-0.0
2,324,311	-		ABIE53_002075	0.39	-1.1
2,324,405	+		ABIE53_002075	0.59	+1.2
2,324,405	+		ABIE53_002075	0.59	-0.1
2,324,405	+		ABIE53_002075	0.59	-0.9
2,324,406	-		ABIE53_002075	0.59	-0.3
2,324,406	-		ABIE53_002075	0.59	+0.9
2,324,406	-		ABIE53_002075	0.59	+0.3
2,324,406	-		ABIE53_002075	0.59	+2.9
2,324,433	-		ABIE53_002075	0.65	-0.4
2,324,462	+		ABIE53_002075	0.71	-2.2
2,324,463	-		ABIE53_002075	0.71	-1.0
2,324,463	-		ABIE53_002075	0.71	+0.2
2,324,471	+		ABIE53_002075	0.73	-0.6
2,324,551	+				-1.4
2,324,551	+				-3.1
2,324,564	-				+0.9
2,324,628	+				+1.7
2,324,628	+				+0.1
2,324,629	-				-0.7
2,324,629	-				-1.1
2,324,634	+				+0.3
2,324,634	+				+0.1
2,324,730	-		ABIE53_002076	0.77	+0.2
2,324,730	-		ABIE53_002076	0.77	-0.2
2,324,733	-		ABIE53_002076	0.79	+1.5
2,324,919	-				-0.1
2,324,947	+				-2.6
2,324,947	+				-2.1
2,325,459	+		ABIE53_002077	0.69	-1.1
2,325,460	-		ABIE53_002077	0.69	-1.7
2,325,545	+		ABIE53_002077	0.79	-1.6
2,325,569	+		ABIE53_002077	0.82	-0.1
2,325,570	-		ABIE53_002077	0.82	-0.7