Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29400

Experiment: Sucrose (C) and Glycine betaine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Glycine betaine (N); with TAPS
6,529,304	+		PFLU_RS29395	0.39	+0.3
6,529,304	+		PFLU_RS29395	0.39	-1.2
6,529,321	+		PFLU_RS29395	0.40	-0.5
6,529,321	+		PFLU_RS29395	0.40	+0.6
6,529,321	+		PFLU_RS29395	0.40	-2.1
6,529,322	-		PFLU_RS29395	0.40	-0.4
6,529,322	-		PFLU_RS29395	0.40	-2.0
6,529,322	-		PFLU_RS29395	0.40	-0.9
6,529,333	-		PFLU_RS29395	0.41	-1.6
6,529,333	-		PFLU_RS29395	0.41	+1.1
6,529,450	+		PFLU_RS29395	0.50	-1.3
6,529,474	-		PFLU_RS29395	0.52	+1.3
6,529,474	-		PFLU_RS29395	0.52	-0.9
6,529,490	+		PFLU_RS29395	0.53	-2.1
6,529,490	+		PFLU_RS29395	0.53	+0.2
6,529,490	+		PFLU_RS29395	0.53	+0.1
6,529,490	+		PFLU_RS29395	0.53	+1.0
6,529,490	+		PFLU_RS29395	0.53	+2.0
6,529,490	+		PFLU_RS29395	0.53	-0.4
6,529,490	+		PFLU_RS29395	0.53	-0.5
6,529,490	+		PFLU_RS29395	0.53	-1.1
6,529,491	-		PFLU_RS29395	0.53	+0.5
6,529,491	-		PFLU_RS29395	0.53	-0.2
6,529,491	-		PFLU_RS29395	0.53	+0.4
6,529,491	-		PFLU_RS29395	0.53	-0.1
6,529,491	-		PFLU_RS29395	0.53	-2.4
6,529,491	-		PFLU_RS29395	0.53	-1.8
6,529,491	-		PFLU_RS29395	0.53	-0.1
6,529,491	-		PFLU_RS29395	0.53	-0.1
6,529,491	-		PFLU_RS29395	0.53	+0.3
6,529,491	-		PFLU_RS29395	0.53	+0.1
6,529,491	-		PFLU_RS29395	0.53	-0.4
6,529,491	-		PFLU_RS29395	0.53	-0.3
6,529,491	-		PFLU_RS29395	0.53	-1.3
6,529,491	-		PFLU_RS29395	0.53	+0.9
6,529,491	-		PFLU_RS29395	0.53	-0.3
6,529,509	-		PFLU_RS29395	0.54	+0.2
6,529,525	+		PFLU_RS29395	0.56	-0.1
6,529,525	+		PFLU_RS29395	0.56	-1.8
6,529,525	+		PFLU_RS29395	0.56	-0.7
6,529,525	+		PFLU_RS29395	0.56	-0.0
6,529,525	+		PFLU_RS29395	0.56	-0.6
6,529,526	-		PFLU_RS29395	0.56	-0.5
6,529,526	-		PFLU_RS29395	0.56	+0.5
6,529,526	-		PFLU_RS29395	0.56	-0.3
6,529,526	-		PFLU_RS29395	0.56	+2.0
6,529,526	-		PFLU_RS29395	0.56	-0.8
6,529,526	-		PFLU_RS29395	0.56	-2.5
6,529,579	+		PFLU_RS29395	0.60	-0.6
6,529,579	+		PFLU_RS29395	0.60	+0.1
6,529,579	+		PFLU_RS29395	0.60	-1.2
6,529,579	+		PFLU_RS29395	0.60	+0.2
6,529,579	+		PFLU_RS29395	0.60	+0.5
6,529,579	+		PFLU_RS29395	0.60	-0.0
6,529,579	+		PFLU_RS29395	0.60	+0.1
6,529,579	+		PFLU_RS29395	0.60	+0.1
6,529,579	+		PFLU_RS29395	0.60	+1.3
6,529,579	+		PFLU_RS29395	0.60	+0.2
6,529,579	+		PFLU_RS29395	0.60	+0.1
6,529,579	+		PFLU_RS29395	0.60	-1.3
6,529,579	+		PFLU_RS29395	0.60	-0.1
6,529,579	+		PFLU_RS29395	0.60	-0.1
6,529,579	+		PFLU_RS29395	0.60	+1.1
6,529,580	-		PFLU_RS29395	0.60	+0.5
6,529,580	-		PFLU_RS29395	0.60	-1.5
6,529,580	-		PFLU_RS29395	0.60	-0.2
6,529,580	-		PFLU_RS29395	0.60	-0.9
6,529,580	-		PFLU_RS29395	0.60	-0.5
6,529,580	-		PFLU_RS29395	0.60	+0.8
6,529,580	-		PFLU_RS29395	0.60	-0.0
6,529,580	-		PFLU_RS29395	0.60	+0.8
6,529,580	-		PFLU_RS29395	0.60	-1.3
6,529,580	-		PFLU_RS29395	0.60	-1.0
6,529,580	-		PFLU_RS29395	0.60	+0.4
6,529,580	-		PFLU_RS29395	0.60	+0.6
6,529,580	-		PFLU_RS29395	0.60	+0.2
6,529,580	-		PFLU_RS29395	0.60	+0.0
6,529,580	-		PFLU_RS29395	0.60	-1.7
6,529,580	-		PFLU_RS29395	0.60	-1.6
6,529,580	-		PFLU_RS29395	0.60	+0.7
6,529,580	-		PFLU_RS29395	0.60	+0.3
6,529,580	-		PFLU_RS29395	0.60	-0.4
6,529,580	-		PFLU_RS29395	0.60	+0.3
6,529,580	-		PFLU_RS29395	0.60	+0.2
6,529,580	-		PFLU_RS29395	0.60	-0.0
6,529,580	-		PFLU_RS29395	0.60	-0.8
6,529,580	-		PFLU_RS29395	0.60	+0.0
6,529,580	-		PFLU_RS29395	0.60	-0.9
6,529,672	+		PFLU_RS29395	0.67	-2.5
6,529,672	+		PFLU_RS29395	0.67	-0.5
6,529,672	+		PFLU_RS29395	0.67	+0.6
6,529,672	+		PFLU_RS29395	0.67	-0.3
6,529,672	+		PFLU_RS29395	0.67	-1.9
6,529,672	+		PFLU_RS29395	0.67	+0.5
6,529,673	-		PFLU_RS29395	0.67	+0.4
6,529,673	-		PFLU_RS29395	0.67	-0.0
6,529,673	-		PFLU_RS29395	0.67	-3.3
6,529,673	-		PFLU_RS29395	0.67	-0.2
6,529,673	-		PFLU_RS29395	0.67	-0.4
6,529,673	-		PFLU_RS29395	0.67	-0.6
6,529,673	-		PFLU_RS29395	0.67	+1.7
6,529,673	-		PFLU_RS29395	0.67	-0.0
6,529,723	+		PFLU_RS29395	0.71	-0.3
6,529,756	+		PFLU_RS29395	0.74	+1.3
6,529,756	+		PFLU_RS29395	0.74	-1.1
6,529,756	+		PFLU_RS29395	0.74	+0.6
6,529,756	+		PFLU_RS29395	0.74	+0.1
6,529,756	+		PFLU_RS29395	0.74	+0.1
6,529,756	+		PFLU_RS29395	0.74	+0.3
6,529,756	+		PFLU_RS29395	0.74	-0.9
6,529,756	+		PFLU_RS29395	0.74	+0.3
6,529,756	+		PFLU_RS29395	0.74	-0.1
6,529,756	+		PFLU_RS29395	0.74	+0.5
6,529,756	+		PFLU_RS29395	0.74	-0.3
6,529,756	+		PFLU_RS29395	0.74	+0.6
6,529,756	+		PFLU_RS29395	0.74	-0.1
6,529,756	+		PFLU_RS29395	0.74	-0.7
6,529,756	+		PFLU_RS29395	0.74	+0.9
6,529,756	+		PFLU_RS29395	0.74	-1.2
6,529,756	+		PFLU_RS29395	0.74	-1.3
6,529,756	+		PFLU_RS29395	0.74	-1.6
6,529,757	-		PFLU_RS29395	0.74	-1.0
6,529,757	-		PFLU_RS29395	0.74	+0.6
6,529,757	-		PFLU_RS29395	0.74	+1.7
6,529,757	-		PFLU_RS29395	0.74	+1.8
6,529,757	-		PFLU_RS29395	0.74	-0.5
6,529,757	-		PFLU_RS29395	0.74	-0.3
6,529,757	-		PFLU_RS29395	0.74	-0.8
6,529,757	-		PFLU_RS29395	0.74	-0.5
6,529,757	-		PFLU_RS29395	0.74	-0.5
6,529,757	-		PFLU_RS29395	0.74	-1.1
6,529,757	-		PFLU_RS29395	0.74	-0.3
6,529,757	-		PFLU_RS29395	0.74	-1.2
6,529,757	-		PFLU_RS29395	0.74	-0.3
6,529,757	-		PFLU_RS29395	0.74	+0.1
6,529,757	-		PFLU_RS29395	0.74	+0.5
6,529,757	-		PFLU_RS29395	0.74	-0.6
6,529,757	-		PFLU_RS29395	0.74	+0.1
6,529,757	-		PFLU_RS29395	0.74	-1.4
6,529,757	-		PFLU_RS29395	0.74	-2.0
6,529,757	-		PFLU_RS29395	0.74	+0.2
6,529,757	-		PFLU_RS29395	0.74	-0.4
6,529,758	+		PFLU_RS29395	0.74	-0.2
6,529,758	+		PFLU_RS29395	0.74	+1.5
6,529,758	+		PFLU_RS29395	0.74	+0.2
6,529,758	+		PFLU_RS29395	0.74	-0.2
6,529,758	+		PFLU_RS29395	0.74	-1.9
6,529,758	+		PFLU_RS29395	0.74	-0.4
6,529,758	+		PFLU_RS29395	0.74	+1.7
6,529,758	+		PFLU_RS29395	0.74	+0.5
6,529,758	+		PFLU_RS29395	0.74	-0.1
6,529,758	+		PFLU_RS29395	0.74	-2.0
6,529,759	-		PFLU_RS29395	0.74	-1.2
6,529,759	-		PFLU_RS29395	0.74	-1.6
6,529,759	-		PFLU_RS29395	0.74	-0.4
6,529,759	-		PFLU_RS29395	0.74	+0.1
6,529,759	-		PFLU_RS29395	0.74	+0.2
6,529,759	-		PFLU_RS29395	0.74	-0.6
6,529,759	-		PFLU_RS29395	0.74	-0.1
6,529,759	-		PFLU_RS29395	0.74	+0.2
6,529,759	-		PFLU_RS29395	0.74	-0.2
6,529,759	-		PFLU_RS29395	0.74	+0.0
6,529,759	-		PFLU_RS29395	0.74	+0.3
6,529,759	-		PFLU_RS29395	0.74	+0.8
6,529,759	-		PFLU_RS29395	0.74	-0.6
6,529,759	-		PFLU_RS29395	0.74	+0.1
6,529,759	-		PFLU_RS29395	0.74	+0.4
6,529,759	-		PFLU_RS29395	0.74	-0.3
6,529,803	-		PFLU_RS29395	0.77	+1.1
6,529,803	-		PFLU_RS29395	0.77	-0.2
6,529,813	+		PFLU_RS29395	0.78	+1.3
6,529,814	-		PFLU_RS29395	0.78	-0.3
6,529,891	+		PFLU_RS29395	0.84	-0.2
6,529,891	+		PFLU_RS29395	0.84	+0.9
6,529,891	+		PFLU_RS29395	0.84	-2.0
6,529,891	+		PFLU_RS29395	0.84	+0.8
6,529,891	+		PFLU_RS29395	0.84	-1.6
6,529,891	+		PFLU_RS29395	0.84	-0.8
6,529,891	+		PFLU_RS29395	0.84	+0.8
6,529,891	+		PFLU_RS29395	0.84	-0.6
6,529,891	+		PFLU_RS29395	0.84	-0.4
6,529,892	-		PFLU_RS29395	0.84	+0.9
6,529,892	-		PFLU_RS29395	0.84	+0.8
6,529,892	-		PFLU_RS29395	0.84	-0.4
6,529,892	-		PFLU_RS29395	0.84	-0.4
6,529,892	-		PFLU_RS29395	0.84	-1.9
6,529,892	-		PFLU_RS29395	0.84	-3.2
6,529,892	-		PFLU_RS29395	0.84	-0.7
6,529,892	-		PFLU_RS29395	0.84	-1.2
6,529,894	+		PFLU_RS29395	0.84	+1.1
6,529,895	-		PFLU_RS29395	0.84	-2.1
6,529,895	-		PFLU_RS29395	0.84	-0.9
6,529,895	-		PFLU_RS29395	0.84	+1.0
6,529,895	-		PFLU_RS29395	0.84	-0.5
6,529,895	-		PFLU_RS29395	0.84	-0.1
6,529,895	-		PFLU_RS29395	0.84	-0.7
6,529,895	-		PFLU_RS29395	0.84	+1.4
6,529,906	+		PFLU_RS29395	0.85	+0.3
6,529,906	+		PFLU_RS29395	0.85	-0.1
6,530,240	-		PFLU_RS29400	0.63	-0.8
6,530,291	+		PFLU_RS29400	0.85	-1.5
6,530,292	-		PFLU_RS29400	0.86	+0.0
6,530,292	-		PFLU_RS29400	0.86	-1.6
6,530,314	+				+0.1
6,530,314	+				+0.2
6,530,350	+				-0.0
6,530,408	+				+0.5
6,530,448	+				-0.6
6,530,448	+				-0.1
6,530,448	+				-0.0
6,530,448	+				-0.2
6,530,449	-				-0.1
6,530,459	+				+0.2
6,530,460	-				-0.6
6,530,466	-				+0.1
6,530,499	+				+0.8
6,530,499	+				-1.1
6,530,499	+				-0.3
6,530,499	+				+1.4
6,530,500	-				+1.1
6,530,518	+				-0.3
6,530,518	+				+2.1
6,530,518	+				+0.0
6,530,518	+				+0.9
6,530,518	+				+0.7
6,530,519	-				+0.6
6,530,519	-				+0.0
6,530,519	-				-0.9
6,530,519	-				-1.2
6,530,519	-				-0.1
6,530,525	+				-2.4
6,530,547	+				-0.7
6,530,548	-				+0.1
6,530,548	-				+0.6
6,530,629	-				+0.7
6,530,629	-				-0.1
6,530,752	+		PFLU_RS29405	0.18	-0.4
6,530,753	-		PFLU_RS29405	0.18	-0.2
6,530,809	+		PFLU_RS29405	0.22	-0.0
6,530,810	-		PFLU_RS29405	0.22	-0.5
6,530,810	-		PFLU_RS29405	0.22	+0.1
6,530,836	+		PFLU_RS29405	0.24	-0.9
6,530,836	+		PFLU_RS29405	0.24	-1.3
6,530,836	+		PFLU_RS29405	0.24	+0.3
6,530,836	+		PFLU_RS29405	0.24	-0.3
6,530,836	+		PFLU_RS29405	0.24	+0.1
6,530,836	+		PFLU_RS29405	0.24	-0.6
6,530,836	+		PFLU_RS29405	0.24	-0.5
6,530,837	-		PFLU_RS29405	0.24	-0.5
6,530,846	+		PFLU_RS29405	0.25	-0.4
6,530,846	+		PFLU_RS29405	0.25	-1.0
6,530,846	+		PFLU_RS29405	0.25	+1.0
6,530,881	+		PFLU_RS29405	0.27	-0.0
6,530,881	+		PFLU_RS29405	0.27	+0.2
6,530,882	-		PFLU_RS29405	0.28	-0.4
6,530,882	-		PFLU_RS29405	0.28	+0.8
6,530,882	-		PFLU_RS29405	0.28	+1.2
6,530,882	-		PFLU_RS29405	0.28	+0.3
6,530,910	+		PFLU_RS29405	0.29	-0.2
6,530,910	+		PFLU_RS29405	0.29	-0.7
6,530,910	+		PFLU_RS29405	0.29	-0.3
6,530,910	+		PFLU_RS29405	0.29	+0.8
6,530,910	+		PFLU_RS29405	0.29	+0.1
6,530,911	-		PFLU_RS29405	0.30	-0.9
6,530,911	-		PFLU_RS29405	0.30	+1.2
6,530,911	-		PFLU_RS29405	0.30	+0.1
6,530,911	-		PFLU_RS29405	0.30	-0.9
6,530,913	+		PFLU_RS29405	0.30	+0.4
6,530,914	-		PFLU_RS29405	0.30	-1.4
6,530,914	-		PFLU_RS29405	0.30	+0.8
6,530,914	-		PFLU_RS29405	0.30	-1.6
6,530,934	-		PFLU_RS29405	0.31	-0.8
6,531,255	+		PFLU_RS29405	0.54	+0.0
6,531,255	+		PFLU_RS29405	0.54	-1.8
6,531,255	+		PFLU_RS29405	0.54	+1.2
6,531,255	+		PFLU_RS29405	0.54	+0.7
6,531,255	+		PFLU_RS29405	0.54	-0.5
6,531,255	+		PFLU_RS29405	0.54	+0.4
6,531,255	+		PFLU_RS29405	0.54	+0.2
6,531,255	+		PFLU_RS29405	0.54	+0.9
6,531,255	+		PFLU_RS29405	0.54	+0.3
6,531,256	-		PFLU_RS29405	0.54	-0.9
6,531,256	-		PFLU_RS29405	0.54	+0.1
6,531,256	-		PFLU_RS29405	0.54	-1.8
6,531,256	-		PFLU_RS29405	0.54	+0.5
6,531,256	-		PFLU_RS29405	0.54	+0.6
6,531,256	-		PFLU_RS29405	0.54	-0.2
6,531,256	-		PFLU_RS29405	0.54	-0.9
6,531,256	-		PFLU_RS29405	0.54	-0.0