Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27975

Experiment: Sucrose (C) and Glycine betaine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Glycine betaine (N); with TAPS
6,225,848	-				-0.6
6,225,879	+				-0.0
6,225,879	+				-0.1
6,225,888	-				-2.0
6,225,899	+				-1.0
6,225,899	+				-1.1
6,225,899	+				+0.6
6,225,899	+				-0.6
6,225,899	+				-0.7
6,225,900	-				-3.4
6,225,966	+				-2.6
6,225,966	+				+0.3
6,225,967	-				-1.1
6,225,967	-				-2.0
6,225,967	-				-0.4
6,225,996	-				-2.5
6,225,996	-				-2.0
6,226,003	+				-2.8
6,226,003	+				-2.7
6,226,004	-				-1.5
6,226,004	-				-1.6
6,226,004	-				-2.4
6,226,048	+				-1.0
6,226,048	+				-3.0
6,226,048	+				-2.5
6,226,048	+				+0.8
6,226,049	-				-1.1
6,226,049	-				-1.7
6,226,049	-				-1.6
6,226,161	+		PFLU_RS27970	0.23	-3.0
6,226,161	+		PFLU_RS27970	0.23	-0.5
6,226,162	-		PFLU_RS27970	0.23	-2.3
6,226,162	-		PFLU_RS27970	0.23	-2.7
6,226,162	-		PFLU_RS27970	0.23	-2.8
6,226,170	+		PFLU_RS27970	0.24	-1.0
6,226,170	+		PFLU_RS27970	0.24	-2.7
6,226,170	+		PFLU_RS27970	0.24	-2.3
6,226,170	+		PFLU_RS27970	0.24	-0.8
6,226,170	+		PFLU_RS27970	0.24	-0.5
6,226,170	+		PFLU_RS27970	0.24	-1.1
6,226,171	-		PFLU_RS27970	0.24	-1.0
6,226,171	-		PFLU_RS27970	0.24	-0.3
6,226,336	+		PFLU_RS27970	0.43	-3.5
6,226,336	+		PFLU_RS27970	0.43	+0.1
6,226,336	+		PFLU_RS27970	0.43	-2.8
6,226,336	+		PFLU_RS27970	0.43	-2.5
6,226,336	+		PFLU_RS27970	0.43	-3.0
6,226,337	-		PFLU_RS27970	0.43	-2.8
6,226,337	-		PFLU_RS27970	0.43	-0.5
6,226,337	-		PFLU_RS27970	0.43	-2.7
6,226,376	+		PFLU_RS27970	0.48	-1.9
6,226,377	-		PFLU_RS27970	0.48	-4.0
6,226,377	-		PFLU_RS27970	0.48	-2.2
6,226,390	+		PFLU_RS27970	0.50	-0.3
6,226,391	-		PFLU_RS27970	0.50	-2.0
6,226,486	+		PFLU_RS27970	0.61	-0.5
6,226,486	+		PFLU_RS27970	0.61	-2.4
6,226,486	+		PFLU_RS27970	0.61	-1.2
6,226,486	+		PFLU_RS27970	0.61	-1.3
6,226,486	+		PFLU_RS27970	0.61	-2.4
6,226,486	+		PFLU_RS27970	0.61	-2.4
6,226,487	-		PFLU_RS27970	0.61	-1.5
6,226,487	-		PFLU_RS27970	0.61	-1.4
6,226,487	-		PFLU_RS27970	0.61	-1.8
6,226,505	+		PFLU_RS27970	0.63	-1.6
6,226,506	-		PFLU_RS27970	0.63	-0.6
6,226,506	-		PFLU_RS27970	0.63	-1.4
6,226,612	-		PFLU_RS27970	0.76	-1.9
6,226,647	-		PFLU_RS27970	0.80	-1.2
6,226,795	-				-2.0
6,226,795	-				-2.9
6,226,795	-				-2.3
6,226,799	+				-1.6
6,226,800	-				-2.2
6,226,820	+				-4.0
6,226,909	+				-1.0
6,227,189	-		PFLU_RS27975	0.32	-2.6
6,227,598	+		PFLU_RS27975	0.67	-3.1
6,227,598	+		PFLU_RS27975	0.67	-3.7
6,227,598	+		PFLU_RS27975	0.67	-1.6
6,227,598	+		PFLU_RS27975	0.67	-1.6
6,227,598	+		PFLU_RS27975	0.67	-2.9
6,227,599	-		PFLU_RS27975	0.67	+1.0
6,227,638	+		PFLU_RS27975	0.70	-1.2
6,227,638	+		PFLU_RS27975	0.70	-2.1
6,227,638	+		PFLU_RS27975	0.70	+0.1
6,227,639	-		PFLU_RS27975	0.70	-0.9
6,227,639	-		PFLU_RS27975	0.70	-2.1
6,227,639	-		PFLU_RS27975	0.70	+0.4
6,227,639	-		PFLU_RS27975	0.70	-1.5
6,227,958	+				-1.2
6,227,958	+				+0.7
6,227,958	+				-0.9
6,227,958	+				-1.7
6,227,958	+				-3.5
6,227,958	+				-2.5
6,227,958	+				-2.8
6,227,959	-				-1.1
6,227,959	-				-1.5
6,227,971	+				-2.5
6,228,012	+				-1.4
6,228,012	+				-2.4
6,228,013	-				+0.5
6,228,013	-				-1.4
6,228,058	+				-0.5
6,228,058	+				-2.2
6,228,058	+				-1.6
6,228,058	+				-1.3
6,228,058	+				-1.3
6,228,058	+				-1.8
6,228,058	+				-2.2
6,228,073	+				+1.0
6,228,073	+				-1.4
6,228,073	+				-2.4
6,228,073	+				-2.9
6,228,118	+				+0.7
6,228,118	+				-1.7
6,228,118	+				-1.2
6,228,118	+				-2.0
6,228,118	+				-0.3
6,228,118	+				-0.2
6,228,118	+				-2.9
6,228,118	+				-1.5
6,228,118	+				+0.1
6,228,118	+				+0.4
6,228,118	+				+0.5
6,228,118	+				-1.7
6,228,119	-				+0.1
6,228,119	-				-0.5
6,228,119	-				-1.5
6,228,119	-				+1.2
6,228,119	-				-0.1
6,228,119	-				-0.8
6,228,119	-				-1.1
6,228,119	-				-1.3
6,228,119	-				-0.0
6,228,129	-				-1.1
6,228,129	-				-0.7
6,228,177	+				-1.5
6,228,177	+				-0.2
6,228,177	+				-0.3
6,228,177	+				-1.3
6,228,177	+				-1.1
6,228,177	+				-0.6
6,228,177	+				-2.3
6,228,178	-				+0.0
6,228,178	-				+0.6
6,228,178	-				+1.7
6,228,178	-				+0.3
6,228,178	-				+2.6
6,228,178	-				+0.2
6,228,178	-				-0.9
6,228,178	-				-1.1
6,228,178	-				-1.1
6,228,178	-				-0.1
6,228,184	+				+0.7
6,228,184	+				-0.5
6,228,184	+				-0.7
6,228,184	+				-0.6
6,228,184	+				-0.3
6,228,184	+				+1.0
6,228,185	-				+0.2
6,228,185	-				+0.1
6,228,185	-				-1.3
6,228,185	-				-1.3
6,228,185	-				-1.3
6,228,185	-				-2.6
6,228,185	-				-0.4
6,228,185	-				+0.7
6,228,186	+				-1.5
6,228,186	+				+0.1
6,228,186	+				+2.7
6,228,186	+				-2.9
6,228,187	-				-0.6
6,228,187	-				-0.6
6,228,187	-				+0.8
6,228,187	-				-0.1
6,228,187	-				+0.6
6,228,187	-				+0.5
6,228,187	-				-0.9
6,228,187	-				+0.0
6,228,187	-				-0.4
6,228,297	+				-2.5
6,228,297	+				+0.3
6,228,297	+				-1.0
6,228,297	+				+3.6
6,228,297	+				-0.6
6,228,298	-				+1.9
6,228,298	-				+0.4
6,228,315	+				+1.7
6,228,316	-				+1.0
6,228,360	+				+0.2
6,228,360	+				+1.0
6,228,361	-				+0.6
6,228,361	-				+0.2
6,228,361	-				+1.7
6,228,361	-				-0.5
6,228,361	-				-0.6
6,228,381	+		PFLU_RS27980	0.10	+0.1
6,228,381	+		PFLU_RS27980	0.10	-0.3
6,228,382	-		PFLU_RS27980	0.10	-0.7
6,228,523	+		PFLU_RS27980	0.17	-0.2
6,228,523	+		PFLU_RS27980	0.17	+0.0
6,228,524	-		PFLU_RS27980	0.17	+0.3
6,228,954	+		PFLU_RS27980	0.39	+0.1
6,228,954	+		PFLU_RS27980	0.39	-0.6
6,228,954	+		PFLU_RS27980	0.39	-0.3
6,228,954	+		PFLU_RS27980	0.39	+0.3
6,228,954	+		PFLU_RS27980	0.39	-2.1
6,228,954	+		PFLU_RS27980	0.39	-0.6
6,228,954	+		PFLU_RS27980	0.39	-0.9
6,228,954	+		PFLU_RS27980	0.39	-0.5
6,228,954	+		PFLU_RS27980	0.39	-1.1
6,228,954	+		PFLU_RS27980	0.39	+0.6
6,228,954	+		PFLU_RS27980	0.39	-1.0
6,228,954	+		PFLU_RS27980	0.39	-1.5
6,228,955	-		PFLU_RS27980	0.39	+0.1
6,228,955	-		PFLU_RS27980	0.39	-0.0
6,228,955	-		PFLU_RS27980	0.39	-0.3
6,228,955	-		PFLU_RS27980	0.39	-1.1
6,228,955	-		PFLU_RS27980	0.39	+0.1
6,228,955	-		PFLU_RS27980	0.39	-0.9
6,228,955	-		PFLU_RS27980	0.39	-1.1
6,228,955	-		PFLU_RS27980	0.39	+0.7
6,228,955	-		PFLU_RS27980	0.39	+0.2
6,228,955	-		PFLU_RS27980	0.39	-2.0
6,228,955	-		PFLU_RS27980	0.39	-0.2
6,228,955	-		PFLU_RS27980	0.39	-1.2
6,228,955	-		PFLU_RS27980	0.39	-1.3
6,228,955	-		PFLU_RS27980	0.39	+0.7
6,228,955	-		PFLU_RS27980	0.39	+0.4
6,228,955	-		PFLU_RS27980	0.39	+0.1
6,228,955	-		PFLU_RS27980	0.39	-0.0
6,228,955	-		PFLU_RS27980	0.39	-0.1
6,228,955	-		PFLU_RS27980	0.39	-1.6
6,228,955	-		PFLU_RS27980	0.39	+0.9