Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS23590

Experiment: Sucrose (C) and Glycine betaine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Glycine betaine (N); with TAPS
5,291,322	+		PFLU_RS23585	0.37	+0.3
5,291,322	+		PFLU_RS23585	0.37	-0.8
5,291,323	-		PFLU_RS23585	0.37	-0.8
5,291,323	-		PFLU_RS23585	0.37	-1.6
5,291,500	+		PFLU_RS23585	0.50	-1.2
5,291,556	+		PFLU_RS23585	0.54	-1.7
5,291,556	+		PFLU_RS23585	0.54	-1.0
5,291,556	+		PFLU_RS23585	0.54	-1.9
5,291,556	+		PFLU_RS23585	0.54	+1.0
5,291,556	+		PFLU_RS23585	0.54	-2.6
5,291,556	+		PFLU_RS23585	0.54	-0.9
5,291,556	+		PFLU_RS23585	0.54	-0.7
5,291,556	+		PFLU_RS23585	0.54	-3.4
5,291,556	+		PFLU_RS23585	0.54	-0.7
5,291,556	+		PFLU_RS23585	0.54	-2.0
5,291,556	+		PFLU_RS23585	0.54	-2.6
5,291,556	+		PFLU_RS23585	0.54	-1.8
5,291,556	+		PFLU_RS23585	0.54	-1.2
5,291,556	+		PFLU_RS23585	0.54	-0.8
5,291,556	+		PFLU_RS23585	0.54	-0.7
5,291,556	+		PFLU_RS23585	0.54	-2.8
5,291,557	-		PFLU_RS23585	0.54	-1.1
5,291,557	-		PFLU_RS23585	0.54	-0.6
5,291,557	-		PFLU_RS23585	0.54	-0.6
5,291,557	-		PFLU_RS23585	0.54	-1.8
5,291,557	-		PFLU_RS23585	0.54	-1.1
5,291,557	-		PFLU_RS23585	0.54	-1.0
5,291,557	-		PFLU_RS23585	0.54	-1.2
5,291,557	-		PFLU_RS23585	0.54	-0.9
5,291,557	-		PFLU_RS23585	0.54	-2.0
5,291,557	-		PFLU_RS23585	0.54	-2.0
5,291,557	-		PFLU_RS23585	0.54	-0.9
5,291,557	-		PFLU_RS23585	0.54	+0.5
5,291,557	-		PFLU_RS23585	0.54	-0.4
5,291,557	-		PFLU_RS23585	0.54	-0.3
5,291,557	-		PFLU_RS23585	0.54	-0.4
5,291,557	-		PFLU_RS23585	0.54	-0.2
5,291,557	-		PFLU_RS23585	0.54	-1.8
5,291,557	-		PFLU_RS23585	0.54	-1.9
5,291,557	-		PFLU_RS23585	0.54	+0.1
5,291,557	-		PFLU_RS23585	0.54	-0.6
5,291,572	+		PFLU_RS23585	0.55	-3.3
5,291,573	-		PFLU_RS23585	0.55	-1.4
5,291,626	-		PFLU_RS23585	0.59	-1.0
5,291,626	-		PFLU_RS23585	0.59	-1.3
5,292,079	+				-2.1
5,292,079	+				-1.1
5,292,080	-				-0.8
5,292,080	-				-2.2
5,292,080	-				-1.6
5,292,080	-				-2.5
5,292,143	+				-1.5
5,292,143	+				-0.8
5,292,143	+				+0.2
5,292,143	+				-0.5
5,292,143	+				-1.3
5,292,143	+				-2.6
5,292,143	+				+0.7
5,292,143	+				-1.6
5,292,143	+				-0.3
5,292,143	+				+0.8
5,292,143	+				-0.6
5,292,143	+				+0.4
5,292,143	+				-1.8
5,292,143	+				-0.6
5,292,143	+				-0.3
5,292,143	+				-2.6
5,292,143	+				-0.9
5,292,143	+				-0.3
5,292,144	-				-2.0
5,292,144	-				-1.1
5,292,144	-				-3.0
5,292,144	-				-0.2
5,292,144	-				-1.7
5,292,144	-				-1.7
5,292,144	-				-0.9
5,292,153	+				-2.2
5,292,153	+				-0.6
5,292,153	+				-2.0
5,292,153	+				-0.9
5,292,153	+				-2.3
5,292,154	-				-2.1
5,292,154	-				-1.5
5,292,154	-				+0.3
5,292,205	+				-2.5
5,292,205	+				-0.4
5,292,205	+				-0.7
5,292,206	-				-1.2
5,292,206	-				+0.5
5,292,209	-				+0.0
5,292,209	-				+2.7
5,292,209	-				+1.0
5,292,244	+				+1.1
5,292,526	-		PFLU_RS23590	0.49	+0.0
5,292,536	-		PFLU_RS23590	0.51	-1.0
5,292,555	-		PFLU_RS23590	0.55	-1.5
5,292,817	+				-1.4
5,292,817	+				+0.8
5,292,817	+				-1.3
5,292,817	+				-0.4
5,292,817	+				+0.4
5,292,824	-				-0.6
5,292,824	-				-0.3
5,292,838	+				+0.3
5,292,838	+				-2.3
5,292,838	+				+2.1
5,292,838	+				-0.9
5,292,838	+				-1.3
5,292,838	+				+1.4
5,292,839	-				+0.1
5,292,839	-				+0.8
5,292,839	-				+0.6
5,292,839	-				+0.2
5,292,844	+				-0.6
5,292,845	-				+0.3
5,292,975	+				+0.0
5,292,975	+				-0.3
5,292,980	+				+0.3
5,292,980	+				+0.4
5,292,980	+				-0.7
5,292,980	+				+0.5
5,292,980	+				-0.3
5,292,980	+				+0.4
5,292,981	-				+0.5
5,292,981	-				+0.7
5,292,981	-				+1.0
5,293,022	-				+0.5
5,293,022	-				+1.1
5,293,184	+		PFLU_RS23595	0.17	+1.7
5,293,184	+		PFLU_RS23595	0.17	+2.1
5,293,184	+		PFLU_RS23595	0.17	+1.3
5,293,184	+		PFLU_RS23595	0.17	+0.5
5,293,184	+		PFLU_RS23595	0.17	+1.1
5,293,184	+		PFLU_RS23595	0.17	-1.1
5,293,184	+		PFLU_RS23595	0.17	+1.4
5,293,184	+		PFLU_RS23595	0.17	+0.5
5,293,184	+		PFLU_RS23595	0.17	+1.8
5,293,184	+		PFLU_RS23595	0.17	+0.8
5,293,184	+		PFLU_RS23595	0.17	+0.2
5,293,184	+		PFLU_RS23595	0.17	-0.5
5,293,185	-		PFLU_RS23595	0.17	+2.0
5,293,185	-		PFLU_RS23595	0.17	+1.1
5,293,185	-		PFLU_RS23595	0.17	+0.6
5,293,185	-		PFLU_RS23595	0.17	+0.5
5,293,185	-		PFLU_RS23595	0.17	+1.1
5,293,185	-		PFLU_RS23595	0.17	+1.2
5,293,185	-		PFLU_RS23595	0.17	+0.5
5,293,185	-		PFLU_RS23595	0.17	-1.2
5,293,185	-		PFLU_RS23595	0.17	+0.1
5,293,185	-		PFLU_RS23595	0.17	+0.7
5,293,185	-		PFLU_RS23595	0.17	+0.6
5,293,302	+		PFLU_RS23595	0.28	-1.0
5,293,302	+		PFLU_RS23595	0.28	+0.9
5,293,302	+		PFLU_RS23595	0.28	-0.7
5,293,302	+		PFLU_RS23595	0.28	-1.0
5,293,303	-		PFLU_RS23595	0.28	+0.9
5,293,346	+		PFLU_RS23595	0.32	+0.8
5,293,382	+		PFLU_RS23595	0.36	+0.5
5,293,382	+		PFLU_RS23595	0.36	+1.4
5,293,382	+		PFLU_RS23595	0.36	+0.1
5,293,382	+		PFLU_RS23595	0.36	+1.5
5,293,382	+		PFLU_RS23595	0.36	+0.8
5,293,382	+		PFLU_RS23595	0.36	-0.3
5,293,382	+		PFLU_RS23595	0.36	-0.0
5,293,382	+		PFLU_RS23595	0.36	-0.0
5,293,382	+		PFLU_RS23595	0.36	-0.2
5,293,382	+		PFLU_RS23595	0.36	+1.6
5,293,382	+		PFLU_RS23595	0.36	+0.7
5,293,382	+		PFLU_RS23595	0.36	+0.8
5,293,382	+		PFLU_RS23595	0.36	+0.1
5,293,382	+		PFLU_RS23595	0.36	+2.1
5,293,382	+		PFLU_RS23595	0.36	+0.2
5,293,382	+		PFLU_RS23595	0.36	+0.1
5,293,383	-		PFLU_RS23595	0.36	-0.5
5,293,383	-		PFLU_RS23595	0.36	+1.6
5,293,383	-		PFLU_RS23595	0.36	+0.2
5,293,383	-		PFLU_RS23595	0.36	-0.1
5,293,383	-		PFLU_RS23595	0.36	+2.0
5,293,383	-		PFLU_RS23595	0.36	-0.0
5,293,383	-		PFLU_RS23595	0.36	+0.9
5,293,383	-		PFLU_RS23595	0.36	-0.6
5,293,383	-		PFLU_RS23595	0.36	+0.6
5,293,383	-		PFLU_RS23595	0.36	+1.3
5,293,383	-		PFLU_RS23595	0.36	+0.9
5,293,383	-		PFLU_RS23595	0.36	+1.0
5,293,478	+		PFLU_RS23595	0.45	+0.5
5,293,478	+		PFLU_RS23595	0.45	+0.6
5,293,478	+		PFLU_RS23595	0.45	+1.0
5,293,478	+		PFLU_RS23595	0.45	+0.6
5,293,478	+		PFLU_RS23595	0.45	+1.0
5,293,478	+		PFLU_RS23595	0.45	+1.5
5,293,478	+		PFLU_RS23595	0.45	+0.5
5,293,478	+		PFLU_RS23595	0.45	-0.6
5,293,478	+		PFLU_RS23595	0.45	+1.1
5,293,478	+		PFLU_RS23595	0.45	+1.5
5,293,478	+		PFLU_RS23595	0.45	+1.5
5,293,478	+		PFLU_RS23595	0.45	+0.8
5,293,478	+		PFLU_RS23595	0.45	+0.1
5,293,478	+		PFLU_RS23595	0.45	+0.8
5,293,478	+		PFLU_RS23595	0.45	+0.1
5,293,479	-		PFLU_RS23595	0.45	+1.9
5,293,479	-		PFLU_RS23595	0.45	+1.4
5,293,479	-		PFLU_RS23595	0.45	+1.6
5,293,479	-		PFLU_RS23595	0.45	+2.3
5,293,479	-		PFLU_RS23595	0.45	+1.2
5,293,479	-		PFLU_RS23595	0.45	-0.0
5,293,479	-		PFLU_RS23595	0.45	+0.8
5,293,479	-		PFLU_RS23595	0.45	+1.4
5,293,479	-		PFLU_RS23595	0.45	+0.5
5,293,592	+		PFLU_RS23595	0.56	+0.3
5,293,592	+		PFLU_RS23595	0.56	+1.2
5,293,592	+		PFLU_RS23595	0.56	-0.0
5,293,592	+		PFLU_RS23595	0.56	+0.9
5,293,592	+		PFLU_RS23595	0.56	-0.3
5,293,592	+		PFLU_RS23595	0.56	+0.6
5,293,592	+		PFLU_RS23595	0.56	+0.4
5,293,592	+		PFLU_RS23595	0.56	+0.6
5,293,592	+		PFLU_RS23595	0.56	+1.3
5,293,592	+		PFLU_RS23595	0.56	+1.5
5,293,592	+		PFLU_RS23595	0.56	-0.3
5,293,593	-		PFLU_RS23595	0.56	+0.7
5,293,593	-		PFLU_RS23595	0.56	-3.0
5,293,593	-		PFLU_RS23595	0.56	-0.9
5,293,593	-		PFLU_RS23595	0.56	+1.6
5,293,593	-		PFLU_RS23595	0.56	+1.2
5,293,593	-		PFLU_RS23595	0.56	+0.6
5,293,593	-		PFLU_RS23595	0.56	+1.1
5,293,670	+		PFLU_RS23595	0.64	-0.8
5,293,671	-		PFLU_RS23595	0.64	+1.0
5,293,671	-		PFLU_RS23595	0.64	-1.1
5,293,671	-		PFLU_RS23595	0.64	-2.7
5,293,743	+		PFLU_RS23595	0.71	-1.4
5,293,743	+		PFLU_RS23595	0.71	+0.0
5,293,743	+		PFLU_RS23595	0.71	+0.8
5,293,743	+		PFLU_RS23595	0.71	+1.0
5,293,743	+		PFLU_RS23595	0.71	-0.4
5,293,743	+		PFLU_RS23595	0.71	+0.2
5,293,743	+		PFLU_RS23595	0.71	+1.3
5,293,744	-		PFLU_RS23595	0.71	+0.8