Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005667

Experiment: RCH2_defined_glucose_5mM with Adenine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Adenine 5 mM
1,970,771	-				-0.5
1,970,879	+		ABIE53_005666	0.40	+1.3
1,970,879	+		ABIE53_005666	0.40	+0.5
1,970,942	-		ABIE53_005666	0.59	+0.6
1,970,942	-		ABIE53_005666	0.59	+0.3
1,971,170	+				+0.7
1,971,170	+				-2.0
1,971,170	+				-0.2
1,971,171	-				-0.5
1,971,171	-				-1.8
1,971,171	-				-2.4
1,971,237	+				+0.9
1,971,237	+				+0.2
1,971,238	-				-0.2
1,971,253	+				-0.7
1,971,253	+				-0.8
1,971,253	+				+1.8
1,971,253	+				-1.5
1,971,253	+				-0.4
1,971,253	+				+1.6
1,971,253	+				-1.3
1,971,253	+				+0.9
1,971,253	+				+2.8
1,971,253	+				-1.0
1,971,253	+				-1.3
1,971,253	+				-0.1
1,971,253	+				-1.6
1,971,254	-				+1.5
1,971,254	-				-0.5
1,971,254	-				+0.9
1,971,254	-				+0.3
1,971,254	-				+2.4
1,971,254	-				-0.5
1,971,254	-				+0.8
1,971,254	-				+1.0
1,971,254	-				-0.2
1,971,254	-				+0.2
1,971,254	-				-3.2
1,971,270	+				-1.2
1,971,403	+				-0.4
1,971,403	+				-1.7
1,971,403	+				+1.1
1,971,403	+				-1.6
1,971,404	-				+2.4
1,971,404	-				-0.6
1,971,546	+				+0.9
1,971,547	-				+0.0
1,971,547	-				-1.0
1,971,564	-				-0.4
1,971,564	-				-1.0
1,971,564	-				+1.5
1,971,610	-				-0.4
1,971,620	-				-1.3
1,971,632	+				-0.8
1,971,670	+				+1.3
1,971,678	+				-1.5
1,971,679	-				-0.5
1,971,679	-				-0.3
1,971,679	-				+1.4
1,971,679	-				+0.9
1,971,706	-				-1.1
1,971,706	-				-2.4
1,971,706	-				+1.8
1,971,736	+				-0.6
1,971,736	+				-0.2
1,971,736	+				+0.2
1,971,736	+				+0.2
1,971,736	+				+0.3
1,971,736	+				+0.9
1,971,737	-				-2.5
1,971,737	-				+0.5
1,971,737	-				-1.5
1,971,737	-				-0.2
1,971,737	-				+2.1
1,971,737	-				-1.5
1,971,737	-				-2.0
1,971,737	-				+0.2
1,971,918	+		ABIE53_005667	0.26	+0.4
1,971,919	-		ABIE53_005667	0.26	-0.0
1,971,919	-		ABIE53_005667	0.26	-1.0
1,971,919	-		ABIE53_005667	0.26	-0.5
1,972,058	-		ABIE53_005667	0.47	-0.5
1,972,191	-		ABIE53_005667	0.66	-3.3
1,972,191	-		ABIE53_005667	0.66	-1.2
1,972,261	-		ABIE53_005667	0.76	+0.8
1,972,262	-		ABIE53_005667	0.76	-0.2
1,972,295	-		ABIE53_005667	0.81	-2.4
1,972,352	+		ABIE53_005667	0.90	+0.2
1,972,352	+		ABIE53_005667	0.90	-2.1
1,972,352	+		ABIE53_005667	0.90	+0.1
1,972,352	+		ABIE53_005667	0.90	+1.1
1,972,352	+		ABIE53_005667	0.90	-0.5
1,972,352	+		ABIE53_005667	0.90	+0.6
1,972,352	+		ABIE53_005667	0.90	-1.4
1,972,352	+		ABIE53_005667	0.90	-0.3
1,972,353	-		ABIE53_005667	0.90	+1.8
1,972,353	-		ABIE53_005667	0.90	+0.8
1,972,353	-		ABIE53_005667	0.90	+0.8
1,972,353	-		ABIE53_005667	0.90	-1.3
1,972,353	-		ABIE53_005667	0.90	+0.4
1,972,395	-				+1.0
1,972,395	-				-0.2
1,972,525	+				-0.4
1,972,525	+				+1.3
1,972,526	-				+0.6
1,972,531	-				+2.4
1,972,577	+				-0.2
1,972,577	+				+0.2
1,972,577	+				-0.0
1,972,578	-				-0.3
1,972,578	-				+1.6
1,972,653	+		ABIE53_005668	0.14	+0.8
1,972,654	-		ABIE53_005668	0.14	-1.7
1,972,730	-		ABIE53_005668	0.21	+0.2
1,972,776	+		ABIE53_005668	0.26	+0.9
1,972,776	+		ABIE53_005668	0.26	+0.3
1,972,776	+		ABIE53_005668	0.26	-0.9
1,972,776	+		ABIE53_005668	0.26	-0.9
1,972,776	+		ABIE53_005668	0.26	-0.5
1,972,776	+		ABIE53_005668	0.26	+0.0
1,972,776	+		ABIE53_005668	0.26	+0.0
1,972,777	-		ABIE53_005668	0.26	+0.1
1,972,777	-		ABIE53_005668	0.26	-2.6
1,972,779	+		ABIE53_005668	0.26	-0.3
1,972,779	+		ABIE53_005668	0.26	+0.5
1,972,780	-		ABIE53_005668	0.26	+0.8
1,972,780	-		ABIE53_005668	0.26	+0.1
1,972,818	+		ABIE53_005668	0.30	+2.6
1,972,819	-		ABIE53_005668	0.30	-0.5
1,972,819	-		ABIE53_005668	0.30	+1.1
1,972,904	+		ABIE53_005668	0.38	+0.6
1,972,904	+		ABIE53_005668	0.38	-0.0
1,972,905	-		ABIE53_005668	0.38	-0.4
1,972,905	-		ABIE53_005668	0.38	-0.3
1,972,905	-		ABIE53_005668	0.38	-0.8
1,972,905	-		ABIE53_005668	0.38	-1.5
1,972,999	+		ABIE53_005668	0.48	-1.4
1,972,999	+		ABIE53_005668	0.48	-1.7
1,973,000	-		ABIE53_005668	0.48	-1.2
1,973,034	-		ABIE53_005668	0.51	+0.1
1,973,034	-		ABIE53_005668	0.51	-0.8
1,973,055	-		ABIE53_005668	0.53	+0.4
1,973,250	+		ABIE53_005668	0.72	-0.8
1,973,250	+		ABIE53_005668	0.72	+0.1
1,973,250	+		ABIE53_005668	0.72	-0.7
1,973,251	-		ABIE53_005668	0.73	-1.4
1,973,252	+		ABIE53_005668	0.73	+1.2
1,973,252	+		ABIE53_005668	0.73	+3.6
1,973,328	-		ABIE53_005668	0.80	-1.3
1,973,328	-		ABIE53_005668	0.80	-0.0
1,973,328	-		ABIE53_005668	0.80	-0.9
1,973,362	+		ABIE53_005668	0.84	-0.3
1,973,363	-		ABIE53_005668	0.84	+1.8