Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002448

Experiment: RCH2_defined_glucose_5mM with Adenine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Adenine 5 mM
2,745,996	+		ABIE53_002447	0.58	-0.0
2,746,027	+		ABIE53_002447	0.60	+0.1
2,746,051	+		ABIE53_002447	0.61	-0.4
2,746,104	-		ABIE53_002447	0.64	-0.4
2,746,123	+		ABIE53_002447	0.66	+0.1
2,746,123	+		ABIE53_002447	0.66	-1.1
2,746,124	-		ABIE53_002447	0.66	+0.1
2,746,339	+		ABIE53_002447	0.78	-0.3
2,746,339	+		ABIE53_002447	0.78	-0.6
2,746,339	+		ABIE53_002447	0.78	-0.4
2,746,340	-		ABIE53_002447	0.78	-2.0
2,746,486	+		ABIE53_002447	0.87	-0.9
2,746,486	+		ABIE53_002447	0.87	-2.1
2,746,487	-		ABIE53_002447	0.87	-0.3
2,746,487	-		ABIE53_002447	0.87	-0.2
2,746,507	+		ABIE53_002447	0.88	-2.2
2,746,507	+		ABIE53_002447	0.88	+1.7
2,746,534	+		ABIE53_002447	0.89	+1.7
2,746,609	+				-0.6
2,746,612	+				-0.6
2,746,613	-				-0.1
2,746,613	-				-0.2
2,746,703	-				+0.5
2,746,739	+				-1.1
2,746,788	+				+0.2
2,746,788	+				-0.8
2,746,788	+				+0.5
2,746,789	-				-0.6
2,746,789	-				-0.0
2,746,789	-				-0.3
2,746,789	-				-2.4
2,746,866	+				-2.4
2,746,867	-				+1.7
2,746,867	-				+3.3
2,746,934	+				+0.2
2,746,966	+				-0.7
2,746,967	-				-0.9
2,747,237	+		ABIE53_002448	0.52	+0.2
2,747,237	+		ABIE53_002448	0.52	-0.7
2,747,238	-		ABIE53_002448	0.52	+2.2
2,747,361	+		ABIE53_002448	0.78	-2.2
2,747,361	+		ABIE53_002448	0.78	-0.2
2,747,362	-		ABIE53_002448	0.78	-0.1
2,747,362	-		ABIE53_002448	0.78	+0.5
2,747,362	-		ABIE53_002448	0.78	+1.2
2,747,415	+		ABIE53_002448	0.89	-0.1
2,747,415	+		ABIE53_002448	0.89	+1.0
2,747,415	+		ABIE53_002448	0.89	-1.6
2,747,416	-		ABIE53_002448	0.89	-1.8
2,747,416	-		ABIE53_002448	0.89	+0.4
2,747,417	+		ABIE53_002448	0.89	-0.6
2,747,417	+		ABIE53_002448	0.89	-0.8
2,747,417	+		ABIE53_002448	0.89	-0.2
2,747,417	+		ABIE53_002448	0.89	+1.7
2,747,417	+		ABIE53_002448	0.89	-1.1
2,747,418	-		ABIE53_002448	0.90	+0.3
2,747,418	-		ABIE53_002448	0.90	+1.4
2,747,467	-				-0.5
2,747,480	+				-0.1
2,747,639	+		ABIE53_002449	0.16	-0.6
2,747,639	+		ABIE53_002449	0.16	+1.7
2,747,639	+		ABIE53_002449	0.16	-0.4
2,747,639	+		ABIE53_002449	0.16	-0.4
2,747,640	-		ABIE53_002449	0.16	-0.1
2,747,640	-		ABIE53_002449	0.16	-0.2
2,747,641	+		ABIE53_002449	0.16	+3.1
2,747,641	+		ABIE53_002449	0.16	+0.1
2,747,641	+		ABIE53_002449	0.16	-1.2
2,747,641	+		ABIE53_002449	0.16	+0.6
2,747,642	-		ABIE53_002449	0.16	-0.6
2,747,642	-		ABIE53_002449	0.16	+0.1
2,747,642	-		ABIE53_002449	0.16	-1.1
2,747,642	-		ABIE53_002449	0.16	+0.4
2,747,642	-		ABIE53_002449	0.16	-0.7
2,747,642	-		ABIE53_002449	0.16	+0.9
2,747,642	-		ABIE53_002449	0.16	+0.3
2,747,642	-		ABIE53_002449	0.16	-0.3
2,747,642	-		ABIE53_002449	0.16	+1.7
2,747,642	-		ABIE53_002449	0.16	-0.0
2,747,643	+		ABIE53_002449	0.16	-1.6
2,747,643	+		ABIE53_002449	0.16	-0.1
2,747,643	+		ABIE53_002449	0.16	+0.7
2,747,644	-		ABIE53_002449	0.17	+1.7
2,747,644	-		ABIE53_002449	0.17	+1.1
2,747,644	-		ABIE53_002449	0.17	+0.1
2,747,644	-		ABIE53_002449	0.17	-1.2
2,747,644	-		ABIE53_002449	0.17	+1.7
2,747,644	-		ABIE53_002449	0.17	+0.2
2,747,803	+		ABIE53_002449	0.52	-1.1
2,747,803	+		ABIE53_002449	0.52	-2.2
2,747,803	+		ABIE53_002449	0.52	+0.2
2,747,803	+		ABIE53_002449	0.52	+3.0
2,747,803	+		ABIE53_002449	0.52	-0.6
2,747,804	-		ABIE53_002449	0.52	+1.2
2,747,845	+		ABIE53_002449	0.61	-1.4
2,747,846	-		ABIE53_002449	0.61	+0.1
2,747,881	+		ABIE53_002449	0.69	+0.7
2,747,881	+		ABIE53_002449	0.69	+0.2
2,747,881	+		ABIE53_002449	0.69	-0.6
2,747,881	+		ABIE53_002449	0.69	-0.1
2,747,881	+		ABIE53_002449	0.69	-0.9
2,747,882	-		ABIE53_002449	0.69	-1.1
2,747,882	-		ABIE53_002449	0.69	-1.4
2,747,882	-		ABIE53_002449	0.69	+0.1
2,747,882	-		ABIE53_002449	0.69	-1.2
2,747,882	-		ABIE53_002449	0.69	-1.7
2,748,042	+				-0.1
2,748,042	+				-0.6
2,748,056	-				+1.3
2,748,056	-				+1.5
2,748,056	-				+1.1
2,748,056	-				-2.0
2,748,105	-				+0.4
2,748,113	-				+1.0
2,748,119	-				+0.2
2,748,146	+				+0.1
2,748,146	+				-0.5
2,748,146	+				+1.1
2,748,147	-				-0.2
2,748,213	+				+1.9
2,748,213	+				+1.1
2,748,214	-				-0.7
2,748,214	-				+2.7
2,748,214	-				+0.7
2,748,214	-				+1.7
2,748,214	-				+1.1
2,748,214	-				+0.7
2,748,242	+				+2.7
2,748,243	-				+2.5
2,748,243	-				+2.6
2,748,243	-				+3.6
2,748,243	-				+3.7
2,748,243	-				+1.4
2,748,314	+		ABIE53_002450	0.10	+3.3
2,748,314	+		ABIE53_002450	0.10	+5.9
2,748,315	-		ABIE53_002450	0.11	+2.7
2,748,315	-		ABIE53_002450	0.11	+2.2
2,748,369	-		ABIE53_002450	0.15	+3.5
2,748,390	+		ABIE53_002450	0.17	+1.6