Experiment: Parafilmed volatile agar plate with no fungus
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS21340 and HSERO_RS21345 are separated by 82 nucleotides HSERO_RS21345 and HSERO_RS21350 are separated by 1 nucleotides HSERO_RS21350 and HSERO_RS21355 are separated by 127 nucleotides
HSERO_RS21340: HSERO_RS21340 - septum formation inhibitor protein, at 4,885,644 to 4,886,438
_RS21340
HSERO_RS21345: HSERO_RS21345 - cell division inhibitor MinD, at 4,886,521 to 4,887,336
_RS21345
HSERO_RS21350: HSERO_RS21350 - cell division topological specificity factor MinE, at 4,887,338 to 4,887,607
_RS21350
HSERO_RS21355: HSERO_RS21355 - transcriptional regulator, at 4,887,735 to 4,888,436
_RS21355
Position (kb) 4886
4887
4888 Strain fitness (log2 ratio) -2
-1
0
1 at 4885.796 kb on + strand, within HSERO_RS21340 at 4885.862 kb on + strand, within HSERO_RS21340 at 4885.870 kb on - strand, within HSERO_RS21340 at 4885.919 kb on - strand, within HSERO_RS21340 at 4886.483 kb on + strand at 4886.495 kb on + strand at 4886.654 kb on + strand, within HSERO_RS21345 at 4886.695 kb on + strand, within HSERO_RS21345 at 4886.732 kb on + strand, within HSERO_RS21345 at 4886.951 kb on + strand, within HSERO_RS21345 at 4887.823 kb on + strand, within HSERO_RS21355 at 4887.831 kb on - strand, within HSERO_RS21355 at 4887.990 kb on + strand, within HSERO_RS21355 at 4887.998 kb on - strand, within HSERO_RS21355 at 4888.040 kb on + strand, within HSERO_RS21355 at 4888.080 kb on + strand, within HSERO_RS21355 at 4888.289 kb on + strand, within HSERO_RS21355
Per-strain Table
Position Strand Gene LocusTag Fraction Parafilmed volatile agar plate with no fungus remove 4,885,796 + HSERO_RS21340 0.19 +0.7 4,885,862 + HSERO_RS21340 0.27 -0.2 4,885,870 - HSERO_RS21340 0.28 -2.1 4,885,919 - HSERO_RS21340 0.35 -0.3 4,886,483 + +0.6 4,886,495 + -0.1 4,886,654 + HSERO_RS21345 0.16 +0.4 4,886,695 + HSERO_RS21345 0.21 -0.9 4,886,732 + HSERO_RS21345 0.26 -1.9 4,886,951 + HSERO_RS21345 0.53 -2.4 4,887,823 + HSERO_RS21355 0.13 -2.4 4,887,831 - HSERO_RS21355 0.14 +1.3 4,887,990 + HSERO_RS21355 0.36 +0.9 4,887,998 - HSERO_RS21355 0.37 +0.1 4,888,040 + HSERO_RS21355 0.43 -0.1 4,888,080 + HSERO_RS21355 0.49 -0.3 4,888,289 + HSERO_RS21355 0.79 -0.0
Or see this region's nucleotide sequence