Experiment: RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x; and 2,2'-Dipyridyl 50 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00825 and BWI76_RS00830 are separated by 151 nucleotides BWI76_RS00830 and BWI76_RS00835 are separated by 97 nucleotides
BWI76_RS00825: BWI76_RS00825 - AraC family transcriptional regulator, at 168,919 to 169,782
_RS00825
BWI76_RS00830: BWI76_RS00830 - metal-binding protein ZinT, at 169,934 to 170,581
_RS00830
BWI76_RS00835: BWI76_RS00835 - phosphoenolpyruvate carboxylase, at 170,679 to 173,330
_RS00835
Position (kb) 169
170
171 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 168.978 kb on - strand at 169.099 kb on - strand, within BWI76_RS00825 at 169.128 kb on + strand, within BWI76_RS00825 at 169.137 kb on + strand, within BWI76_RS00825 at 169.285 kb on + strand, within BWI76_RS00825 at 169.293 kb on - strand, within BWI76_RS00825 at 169.346 kb on - strand, within BWI76_RS00825 at 169.495 kb on - strand, within BWI76_RS00825 at 169.509 kb on + strand, within BWI76_RS00825 at 169.529 kb on - strand, within BWI76_RS00825 at 169.610 kb on + strand, within BWI76_RS00825 at 169.625 kb on + strand, within BWI76_RS00825 at 169.825 kb on + strand at 169.843 kb on - strand at 169.919 kb on + strand at 169.927 kb on - strand at 169.982 kb on - strand at 170.030 kb on - strand, within BWI76_RS00830 at 170.082 kb on - strand, within BWI76_RS00830 at 170.235 kb on - strand, within BWI76_RS00830 at 170.241 kb on + strand, within BWI76_RS00830 at 170.251 kb on + strand, within BWI76_RS00830 at 170.552 kb on - strand at 170.664 kb on - strand at 170.694 kb on - strand at 170.785 kb on + strand at 170.917 kb on - strand at 170.939 kb on + strand at 170.950 kb on + strand, within BWI76_RS00835 at 170.968 kb on - strand, within BWI76_RS00835 at 171.149 kb on - strand, within BWI76_RS00835 at 171.387 kb on - strand, within BWI76_RS00835 at 171.426 kb on + strand, within BWI76_RS00835 at 171.434 kb on - strand, within BWI76_RS00835 at 171.434 kb on - strand, within BWI76_RS00835 at 171.502 kb on - strand, within BWI76_RS00835
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x; and 2,2'-Dipyridyl 50 uM remove 168,978 - +1.3 169,099 - BWI76_RS00825 0.21 +0.5 169,128 + BWI76_RS00825 0.24 -0.3 169,137 + BWI76_RS00825 0.25 -0.6 169,285 + BWI76_RS00825 0.42 +0.5 169,293 - BWI76_RS00825 0.43 -0.5 169,346 - BWI76_RS00825 0.49 -0.5 169,495 - BWI76_RS00825 0.67 +0.6 169,509 + BWI76_RS00825 0.68 +0.5 169,529 - BWI76_RS00825 0.71 +0.1 169,610 + BWI76_RS00825 0.80 -0.0 169,625 + BWI76_RS00825 0.82 +0.3 169,825 + -0.3 169,843 - +0.9 169,919 + -1.1 169,927 - +0.6 169,982 - -0.2 170,030 - BWI76_RS00830 0.15 -0.2 170,082 - BWI76_RS00830 0.23 -0.6 170,235 - BWI76_RS00830 0.46 -0.4 170,241 + BWI76_RS00830 0.47 -0.5 170,251 + BWI76_RS00830 0.49 -1.2 170,552 - +0.3 170,664 - +0.3 170,694 - +0.5 170,785 + -1.3 170,917 - -1.8 170,939 + -2.2 170,950 + BWI76_RS00835 0.10 -1.8 170,968 - BWI76_RS00835 0.11 -1.5 171,149 - BWI76_RS00835 0.18 -1.7 171,387 - BWI76_RS00835 0.27 -0.5 171,426 + BWI76_RS00835 0.28 -1.1 171,434 - BWI76_RS00835 0.28 -2.9 171,434 - BWI76_RS00835 0.28 -2.5 171,502 - BWI76_RS00835 0.31 -1.1
Or see this region's nucleotide sequence