Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005712

Experiment: RCH2_defined_glucose_5mM with Serotonin 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Serotonin 5 mM
2,010,864	-		ABIE53_005711	0.19	-0.8
2,010,864	-		ABIE53_005711	0.19	+1.3
2,010,864	-		ABIE53_005711	0.19	+2.8
2,010,902	+		ABIE53_005711	0.22	+2.5
2,010,920	+		ABIE53_005711	0.24	+0.5
2,011,040	+		ABIE53_005711	0.35	+0.1
2,011,041	-		ABIE53_005711	0.35	+3.0
2,011,146	-		ABIE53_005711	0.44	+2.7
2,011,191	-		ABIE53_005711	0.49	+0.1
2,011,191	-		ABIE53_005711	0.49	+0.6
2,011,191	-		ABIE53_005711	0.49	+2.2
2,011,206	+		ABIE53_005711	0.50	+0.2
2,011,207	-		ABIE53_005711	0.50	-0.2
2,011,307	+		ABIE53_005711	0.59	-0.5
2,011,346	+		ABIE53_005711	0.63	-0.1
2,011,347	-		ABIE53_005711	0.63	+0.8
2,011,352	+		ABIE53_005711	0.63	+0.6
2,011,353	-		ABIE53_005711	0.63	-1.7
2,011,353	-		ABIE53_005711	0.63	+2.0
2,011,353	-		ABIE53_005711	0.63	+0.0
2,011,549	-		ABIE53_005711	0.81	-1.8
2,011,549	-		ABIE53_005711	0.81	+1.5
2,011,634	+		ABIE53_005711	0.89	-0.5
2,011,703	+				-1.1
2,011,772	+				+3.0
2,011,773	-				-1.0
2,011,923	+		ABIE53_005712	0.11	-0.0
2,011,944	+		ABIE53_005712	0.13	+0.0
2,011,945	-		ABIE53_005712	0.13	+1.8
2,012,169	+		ABIE53_005712	0.34	-1.1
2,012,170	-		ABIE53_005712	0.34	+2.3
2,012,170	-		ABIE53_005712	0.34	-0.0
2,012,191	-		ABIE53_005712	0.36	+2.4
2,012,191	-		ABIE53_005712	0.36	-0.3
2,012,191	-		ABIE53_005712	0.36	-0.2
2,012,406	+		ABIE53_005712	0.56	-0.6
2,012,407	-		ABIE53_005712	0.56	+1.0
2,012,461	-		ABIE53_005712	0.61	-0.4
2,012,836	-				+1.7
2,012,867	-				-0.8
2,013,025	+				-0.7
2,013,040	+				-0.4
2,013,236	-		ABIE53_005713	0.21	-2.2
2,013,419	-		ABIE53_005713	0.31	-1.3
2,013,758	+		ABIE53_005713	0.50	-0.3
2,013,833	-		ABIE53_005713	0.55	+0.6
2,013,838	+		ABIE53_005713	0.55	-0.8