Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002082

Experiment: RCH2_defined_glucose_5mM with Serotonin 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Serotonin 5 mM
2,331,085	+		ABIE53_002080	0.89	-0.1
2,331,085	+		ABIE53_002080	0.89	+0.1
2,331,086	-		ABIE53_002080	0.90	-0.2
2,331,086	-		ABIE53_002080	0.90	+0.3
2,331,086	-		ABIE53_002080	0.90	-2.1
2,331,139	+				-0.6
2,331,150	+				+2.7
2,331,150	+				-0.6
2,331,150	+				-1.3
2,331,165	+				-1.6
2,331,166	-				+0.3
2,331,267	+				-0.0
2,331,267	+				+0.0
2,331,322	+				-0.0
2,331,322	+				-0.8
2,331,346	-				+2.0
2,331,379	+				+3.0
2,331,413	+				-0.0
2,331,414	+				+0.3
2,331,415	-				-0.3
2,331,423	+				-0.6
2,331,423	+				-1.5
2,331,424	-				-1.8
2,331,427	+				-0.0
2,331,427	+				+0.5
2,331,427	+				-1.7
2,331,428	-				+0.2
2,331,428	-				-0.0
2,331,428	-				+1.0
2,331,428	-				-1.6
2,331,428	-				+1.0
2,331,428	-				-1.5
2,331,428	-				-0.5
2,331,428	-				-0.7
2,331,428	-				+0.6
2,331,432	+				-0.2
2,331,432	+				-1.0
2,331,433	-				+0.3
2,331,433	-				+0.4
2,331,441	+				+1.0
2,331,442	-				-0.8
2,331,459	-				-2.3
2,331,494	+				-0.3
2,331,494	+				+0.0
2,331,494	+				+2.0
2,331,495	-				+0.9
2,331,495	-				+1.6
2,331,495	-				-0.1
2,331,502	+				+1.3
2,331,502	+				-0.7
2,331,502	+				+1.1
2,331,502	+				-1.0
2,331,503	-				+0.3
2,331,503	-				-1.3
2,331,503	-				+0.5
2,331,503	-				-0.1
2,331,511	+				+2.0
2,331,511	+				+0.2
2,331,511	+				+1.0
2,331,511	+				+0.4
2,331,511	+				-1.3
2,331,511	+				+0.4
2,331,511	+				-1.3
2,331,512	-				-0.3
2,331,512	-				+1.0
2,331,512	-				-0.0
2,331,512	-				-1.1
2,331,521	-				-1.0
2,331,540	+				-0.2
2,331,541	-				-1.5
2,331,584	+				-0.1
2,331,584	+				-1.1
2,331,584	+				-1.7
2,331,584	+				-0.3
2,331,584	+				-0.1
2,331,584	+				-0.5
2,331,584	+				-0.4
2,331,585	-				-0.3
2,331,585	-				-0.8
2,331,585	-				-0.3
2,331,585	-				-0.0
2,331,585	-				-0.3
2,331,599	+				-0.0
2,331,599	+				-1.4
2,331,652	+				-2.2
2,331,652	+				-0.2
2,331,653	-				+2.6
2,331,653	-				-0.6
2,331,972	+				+1.0
2,331,972	+				-0.6
2,331,973	-				-0.2
2,331,976	+				-0.9
2,331,976	+				-1.5
2,331,977	-				+0.5
2,331,977	-				+0.1
2,332,076	-		ABIE53_002082	0.10	-0.2
2,332,112	-		ABIE53_002082	0.14	-0.6
2,332,369	+		ABIE53_002082	0.41	-0.3
2,332,370	-		ABIE53_002082	0.41	-0.9
2,332,849	-				-0.2
2,332,992	+				-0.2
2,332,993	-				+0.4
2,333,004	+				-0.7
2,333,005	-				-2.1
2,333,005	-				+0.6
2,333,005	-				+0.7
2,333,032	+				+1.3
2,333,032	+				-0.0
2,333,033	-				+1.0
2,333,100	+				-2.5
2,333,100	+				+0.5
2,333,101	-				+3.0
2,333,101	-				+2.0
2,333,101	-				-0.8
2,333,126	-				-2.3
2,333,239	-		ABIE53_002083	0.14	-1.2
2,333,365	+		ABIE53_002083	0.26	-0.5
2,333,365	+		ABIE53_002083	0.26	+0.6
2,333,366	-		ABIE53_002083	0.26	-1.5
2,333,366	-		ABIE53_002083	0.26	+1.0
2,333,366	-		ABIE53_002083	0.26	-0.6
2,333,366	-		ABIE53_002083	0.26	-0.8
2,333,694	+		ABIE53_002083	0.58	-1.8
2,333,694	+		ABIE53_002083	0.58	-0.3
2,333,695	-		ABIE53_002083	0.58	-1.2
2,333,695	-		ABIE53_002083	0.58	+0.7
2,333,695	-		ABIE53_002083	0.58	-0.3
2,333,695	-		ABIE53_002083	0.58	-0.0
2,333,758	+		ABIE53_002083	0.65	+0.1
2,333,758	+		ABIE53_002083	0.65	-1.3
2,333,758	+		ABIE53_002083	0.65	+1.8
2,333,759	-		ABIE53_002083	0.65	-0.1
2,333,759	-		ABIE53_002083	0.65	+1.0