Experiment: RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x; and Iron (II) 0.209 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06820 and BWI76_RS06825 are separated by 57 nucleotides BWI76_RS06825 and BWI76_RS06830 overlap by 1 nucleotides BWI76_RS06830 and BWI76_RS06835 are separated by 111 nucleotides
BWI76_RS06820: BWI76_RS06820 - DNA polymerase III subunit gamma/tau, at 1,430,090 to 1,431,991
_RS06820
BWI76_RS06825: BWI76_RS06825 - nucleoid-associated protein, YbaB/EbfC family, at 1,432,049 to 1,432,381
_RS06825
BWI76_RS06830: BWI76_RS06830 - recombination protein RecR, at 1,432,381 to 1,432,986
_RS06830
BWI76_RS06835: BWI76_RS06835 - molecular chaperone HtpG, at 1,433,098 to 1,434,972
_RS06835
Position (kb)
1432
1433 Strain fitness (log2 ratio)
-1
0
1 at 1432.436 kb on + strand at 1432.636 kb on + strand, within BWI76_RS06830 at 1432.694 kb on + strand, within BWI76_RS06830 at 1432.869 kb on + strand, within BWI76_RS06830 at 1432.874 kb on + strand, within BWI76_RS06830 at 1433.024 kb on + strand at 1433.035 kb on + strand at 1433.213 kb on + strand at 1433.347 kb on + strand, within BWI76_RS06835 at 1433.436 kb on + strand, within BWI76_RS06835 at 1433.436 kb on + strand, within BWI76_RS06835 at 1433.535 kb on - strand, within BWI76_RS06835 at 1433.914 kb on + strand, within BWI76_RS06835 at 1433.928 kb on + strand, within BWI76_RS06835
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x; and Iron (II) 0.209 mg/mL remove 1,432,436 + -0.2 1,432,636 + BWI76_RS06830 0.42 -0.3 1,432,694 + BWI76_RS06830 0.52 -1.5 1,432,869 + BWI76_RS06830 0.81 -0.6 1,432,874 + BWI76_RS06830 0.81 -1.6 1,433,024 + -0.4 1,433,035 + -0.8 1,433,213 + -0.1 1,433,347 + BWI76_RS06835 0.13 -0.1 1,433,436 + BWI76_RS06835 0.18 -0.7 1,433,436 + BWI76_RS06835 0.18 +0.1 1,433,535 - BWI76_RS06835 0.23 +0.3 1,433,914 + BWI76_RS06835 0.44 -0.2 1,433,928 + BWI76_RS06835 0.44 -0.1
Or see this region's nucleotide sequence