Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002432

Experiment: RCH2_defined_glucose_5mM with Lumichrome 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Lumichrome 5 mM
2,727,570	+		ABIE53_002431	0.34	-0.3
2,727,571	-		ABIE53_002431	0.35	+0.6
2,727,592	+		ABIE53_002431	0.36	+3.2
2,727,593	-		ABIE53_002431	0.36	-1.8
2,727,595	+		ABIE53_002431	0.36	+0.7
2,727,595	+		ABIE53_002431	0.36	+0.3
2,727,595	+		ABIE53_002431	0.36	+0.7
2,727,595	+		ABIE53_002431	0.36	-0.3
2,727,595	+		ABIE53_002431	0.36	-1.7
2,727,595	+		ABIE53_002431	0.36	+1.9
2,727,595	+		ABIE53_002431	0.36	+0.3
2,727,596	-		ABIE53_002431	0.36	+0.6
2,727,596	-		ABIE53_002431	0.36	+0.1
2,727,596	-		ABIE53_002431	0.36	+0.7
2,727,596	-		ABIE53_002431	0.36	+0.4
2,727,596	-		ABIE53_002431	0.36	+0.1
2,727,596	-		ABIE53_002431	0.36	-1.9
2,727,748	+		ABIE53_002431	0.47	-2.7
2,727,748	+		ABIE53_002431	0.47	+0.1
2,727,748	+		ABIE53_002431	0.47	-0.6
2,727,749	-		ABIE53_002431	0.47	+0.2
2,727,749	-		ABIE53_002431	0.47	-0.4
2,727,749	-		ABIE53_002431	0.47	+0.2
2,727,809	-		ABIE53_002431	0.52	-0.1
2,727,809	-		ABIE53_002431	0.52	-0.1
2,727,809	-		ABIE53_002431	0.52	+0.7
2,727,935	+		ABIE53_002431	0.61	+0.3
2,728,025	+		ABIE53_002431	0.67	-0.1
2,728,026	-		ABIE53_002431	0.67	-1.8
2,728,157	+		ABIE53_002431	0.77	-0.3
2,728,157	+		ABIE53_002431	0.77	-0.9
2,728,157	+		ABIE53_002431	0.77	+1.7
2,728,158	-		ABIE53_002431	0.77	-0.1
2,728,158	-		ABIE53_002431	0.77	-1.2
2,728,195	+		ABIE53_002431	0.79	-0.9
2,728,195	+		ABIE53_002431	0.79	+0.2
2,728,195	+		ABIE53_002431	0.79	+0.1
2,728,195	+		ABIE53_002431	0.79	-0.4
2,728,195	+		ABIE53_002431	0.79	-0.9
2,728,196	-		ABIE53_002431	0.79	-0.5
2,728,444	+				+0.9
2,728,444	+				+1.0
2,728,444	+				-0.7
2,728,444	+				+1.7
2,728,444	+				-0.2
2,728,444	+				-1.2
2,728,444	+				-0.2
2,728,445	-				-0.2
2,728,445	-				-0.0
2,728,445	-				+0.8
2,728,445	-				-0.3
2,728,445	-				+0.3
2,728,445	-				-1.5
2,728,445	-				+2.1
2,728,445	-				-0.7
2,728,445	-				+0.4
2,728,445	-				-0.0
2,728,448	+				+1.4
2,728,449	-				-0.5
2,728,449	-				+0.1
2,728,497	-				+0.3
2,728,497	-				+1.7
2,728,497	-				+0.9
2,728,800	+		ABIE53_002432	0.32	+0.4
2,728,800	+		ABIE53_002432	0.32	+0.1
2,728,801	-		ABIE53_002432	0.32	-0.3
2,728,801	-		ABIE53_002432	0.32	+0.4
2,728,828	+		ABIE53_002432	0.35	-1.6
2,728,828	+		ABIE53_002432	0.35	+1.4
2,728,828	+		ABIE53_002432	0.35	-0.3
2,728,828	+		ABIE53_002432	0.35	-0.9
2,728,828	+		ABIE53_002432	0.35	+0.1
2,728,828	+		ABIE53_002432	0.35	-2.3
2,728,829	-		ABIE53_002432	0.35	+1.9
2,728,829	-		ABIE53_002432	0.35	+1.3
2,728,829	-		ABIE53_002432	0.35	+1.0
2,728,829	-		ABIE53_002432	0.35	+1.3
2,728,829	-		ABIE53_002432	0.35	+0.7
2,728,829	-		ABIE53_002432	0.35	+1.3
2,728,829	-		ABIE53_002432	0.35	+1.4
2,728,829	-		ABIE53_002432	0.35	+0.7
2,728,829	-		ABIE53_002432	0.35	+1.8
2,728,829	-		ABIE53_002432	0.35	+0.7
2,728,830	+		ABIE53_002432	0.35	+0.7
2,728,830	+		ABIE53_002432	0.35	-0.8
2,728,830	+		ABIE53_002432	0.35	-1.4
2,728,830	+		ABIE53_002432	0.35	+1.2
2,728,830	+		ABIE53_002432	0.35	+0.7
2,728,830	+		ABIE53_002432	0.35	+0.1
2,728,830	+		ABIE53_002432	0.35	+0.4
2,728,830	+		ABIE53_002432	0.35	-0.1
2,728,830	+		ABIE53_002432	0.35	+0.4
2,728,831	-		ABIE53_002432	0.35	+0.7
2,728,831	-		ABIE53_002432	0.35	+0.5
2,728,831	-		ABIE53_002432	0.35	+1.7
2,728,831	-		ABIE53_002432	0.35	+1.3
2,728,831	-		ABIE53_002432	0.35	+2.0
2,728,831	-		ABIE53_002432	0.35	+1.4
2,728,831	-		ABIE53_002432	0.35	+1.4
2,728,831	-		ABIE53_002432	0.35	-0.9
2,728,831	-		ABIE53_002432	0.35	+1.7
2,728,882	+		ABIE53_002432	0.41	+0.7
2,728,883	-		ABIE53_002432	0.41	+0.5
2,728,883	-		ABIE53_002432	0.41	+1.9
2,728,956	+		ABIE53_002432	0.48	-0.5
2,728,956	+		ABIE53_002432	0.48	+1.5
2,728,956	+		ABIE53_002432	0.48	-0.0
2,728,956	+		ABIE53_002432	0.48	-0.6
2,728,956	+		ABIE53_002432	0.48	-0.9
2,728,956	+		ABIE53_002432	0.48	-2.3
2,728,956	+		ABIE53_002432	0.48	-0.2
2,728,957	-		ABIE53_002432	0.49	+0.9
2,728,957	-		ABIE53_002432	0.49	+1.2
2,728,957	-		ABIE53_002432	0.49	+0.9
2,729,029	-		ABIE53_002432	0.56	+0.4
2,729,030	+		ABIE53_002432	0.56	-0.5
2,729,030	+		ABIE53_002432	0.56	+2.2
2,729,030	+		ABIE53_002432	0.56	-0.8
2,729,030	+		ABIE53_002432	0.56	-1.8
2,729,030	+		ABIE53_002432	0.56	+0.7
2,729,031	-		ABIE53_002432	0.56	+0.1
2,729,031	-		ABIE53_002432	0.56	+1.2
2,729,031	-		ABIE53_002432	0.56	-0.2
2,729,031	-		ABIE53_002432	0.56	+0.7
2,729,031	-		ABIE53_002432	0.56	+0.7
2,729,031	-		ABIE53_002432	0.56	+4.0
2,729,099	+		ABIE53_002432	0.63	-0.0
2,729,100	-		ABIE53_002432	0.64	+1.4
2,729,189	+		ABIE53_002432	0.73	-0.7
2,729,189	+		ABIE53_002432	0.73	+0.4
2,729,190	-		ABIE53_002432	0.73	+2.4
2,729,190	-		ABIE53_002432	0.73	+0.3
2,729,190	-		ABIE53_002432	0.73	+0.0
2,729,190	-		ABIE53_002432	0.73	+0.6
2,729,241	-		ABIE53_002432	0.78	-0.2
2,729,692	+		ABIE53_002433	0.34	-0.2
2,729,692	+		ABIE53_002433	0.34	-0.1
2,729,693	-		ABIE53_002433	0.34	+0.1
2,729,693	-		ABIE53_002433	0.34	+0.6
2,729,693	-		ABIE53_002433	0.34	-0.2
2,729,693	-		ABIE53_002433	0.34	+1.3
2,729,926	+		ABIE53_002433	0.59	+1.1
2,729,926	+		ABIE53_002433	0.59	-1.7
2,729,927	-		ABIE53_002433	0.60	+0.1
2,730,124	+		ABIE53_002433	0.81	+0.5
2,730,124	+		ABIE53_002433	0.81	-0.3
2,730,124	+		ABIE53_002433	0.81	-0.9
2,730,124	+		ABIE53_002433	0.81	+0.2
2,730,124	+		ABIE53_002433	0.81	+0.6
2,730,124	+		ABIE53_002433	0.81	+1.6
2,730,125	-		ABIE53_002433	0.81	+1.0
2,730,125	-		ABIE53_002433	0.81	-1.2
2,730,125	-		ABIE53_002433	0.81	-2.7
2,730,125	-		ABIE53_002433	0.81	+0.7
2,730,125	-		ABIE53_002433	0.81	-0.2
2,730,299	+				+0.1
2,730,299	+				+0.1
2,730,300	-				-0.3
2,730,300	-				+0.9
2,730,300	-				+0.4
2,730,300	-				+1.4
2,730,374	+		ABIE53_002434	0.20	+1.0
2,730,410	+		ABIE53_002434	0.30	+0.8
2,730,410	+		ABIE53_002434	0.30	-0.1
2,730,411	-		ABIE53_002434	0.30	+1.1
2,730,420	-		ABIE53_002434	0.33	+0.7