Experiment: RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19785 and BWI76_RS19790 overlap by 1 nucleotides BWI76_RS19790 and BWI76_RS19795 are separated by 1 nucleotides
BWI76_RS19785: BWI76_RS19785 - microcin C ABC transporter permease YejB, at 4,137,503 to 4,138,597
_RS19785
BWI76_RS19790: BWI76_RS19790 - putative binding-protein-dependent transporter, at 4,138,597 to 4,139,622
_RS19790
BWI76_RS19795: BWI76_RS19795 - microcin C ABC transporter ATP-binding protein YejF, at 4,139,624 to 4,141,213
_RS19795
Position (kb)
4138
4139
4140 Strain fitness (log2 ratio)
-1
0
1
2 at 4137.747 kb on + strand, within BWI76_RS19785 at 4137.922 kb on - strand, within BWI76_RS19785 at 4137.935 kb on + strand, within BWI76_RS19785 at 4138.357 kb on - strand, within BWI76_RS19785 at 4138.387 kb on - strand, within BWI76_RS19785 at 4138.422 kb on - strand, within BWI76_RS19785 at 4138.554 kb on + strand at 4138.562 kb on - strand at 4138.837 kb on - strand, within BWI76_RS19790 at 4138.964 kb on - strand, within BWI76_RS19790 at 4139.086 kb on + strand, within BWI76_RS19790 at 4139.115 kb on + strand, within BWI76_RS19790 at 4139.181 kb on + strand, within BWI76_RS19790 at 4139.189 kb on - strand, within BWI76_RS19790 at 4139.393 kb on + strand, within BWI76_RS19790 at 4140.272 kb on - strand, within BWI76_RS19795 at 4140.272 kb on - strand, within BWI76_RS19795 at 4140.381 kb on - strand, within BWI76_RS19795 at 4140.381 kb on - strand, within BWI76_RS19795 at 4140.409 kb on + strand, within BWI76_RS19795 at 4140.577 kb on - strand, within BWI76_RS19795
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x remove 4,137,747 + BWI76_RS19785 0.22 -0.2 4,137,922 - BWI76_RS19785 0.38 -0.7 4,137,935 + BWI76_RS19785 0.39 +0.4 4,138,357 - BWI76_RS19785 0.78 +0.6 4,138,387 - BWI76_RS19785 0.81 +0.6 4,138,422 - BWI76_RS19785 0.84 +0.0 4,138,554 + +0.2 4,138,562 - -0.4 4,138,837 - BWI76_RS19790 0.23 +0.8 4,138,964 - BWI76_RS19790 0.36 +0.5 4,139,086 + BWI76_RS19790 0.48 -0.1 4,139,115 + BWI76_RS19790 0.50 +0.4 4,139,181 + BWI76_RS19790 0.57 -0.4 4,139,189 - BWI76_RS19790 0.58 -0.0 4,139,393 + BWI76_RS19790 0.78 +1.0 4,140,272 - BWI76_RS19795 0.41 -0.1 4,140,272 - BWI76_RS19795 0.41 +0.9 4,140,381 - BWI76_RS19795 0.48 +0.0 4,140,381 - BWI76_RS19795 0.48 -0.3 4,140,409 + BWI76_RS19795 0.49 +2.1 4,140,577 - BWI76_RS19795 0.60 +0.4
Or see this region's nucleotide sequence