Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003493

Experiment: RCH2_defined_glucose_5mM with Salicylic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Salicylic 5 mM
3,919,870	+				-0.5
3,919,870	+				+2.7
3,919,870	+				-0.6
3,919,870	+				+0.9
3,919,870	+				-0.1
3,919,870	+				+0.5
3,919,871	-				-1.6
3,919,871	-				-0.7
3,919,871	-				+1.6
3,919,871	-				+0.2
3,919,871	-				-0.5
3,919,912	+				-0.5
3,919,912	+				-0.5
3,919,913	-				+0.7
3,919,913	-				-2.4
3,919,922	+				+0.5
3,919,922	+				-0.4
3,919,922	+				+1.9
3,919,922	+				-0.1
3,919,922	+				-0.4
3,919,922	+				+0.1
3,919,922	+				+0.2
3,919,922	+				-0.1
3,919,923	-				+0.5
3,919,923	-				-1.1
3,919,923	-				-1.1
3,919,923	-				+0.5
3,919,923	-				-0.3
3,920,014	+				-0.4
3,920,014	+				-0.1
3,920,014	+				+0.7
3,920,014	+				+1.9
3,920,014	+				-0.5
3,920,014	+				-0.7
3,920,014	+				-0.1
3,920,014	+				-1.1
3,920,014	+				+1.7
3,920,014	+				-0.1
3,920,014	+				-0.9
3,920,014	+				+0.3
3,920,014	+				-1.0
3,920,014	+				-0.7
3,920,014	+				-0.1
3,920,014	+				+2.5
3,920,014	+				-0.9
3,920,014	+				-0.4
3,920,014	+				-0.7
3,920,014	+				+0.9
3,920,014	+				-2.4
3,920,015	-				-0.2
3,920,015	-				+0.2
3,920,015	-				+1.6
3,920,015	-				-0.5
3,920,015	-				+0.3
3,920,015	-				-0.3
3,920,015	-				+0.2
3,920,015	-				-1.3
3,920,015	-				-0.6
3,920,015	-				-1.5
3,920,015	-				+0.8
3,920,015	-				-0.9
3,920,015	-				-1.5
3,920,015	-				+2.3
3,920,046	+		ABIE53_003492	0.10	-2.0
3,920,047	-		ABIE53_003492	0.11	+0.8
3,920,047	-		ABIE53_003492	0.11	+0.2
3,920,047	-		ABIE53_003492	0.11	+0.0
3,920,047	-		ABIE53_003492	0.11	+1.9
3,920,079	+		ABIE53_003492	0.24	-0.7
3,920,079	+		ABIE53_003492	0.24	+0.9
3,920,079	+		ABIE53_003492	0.24	+0.3
3,920,079	+		ABIE53_003492	0.24	-0.1
3,920,079	+		ABIE53_003492	0.24	+0.1
3,920,079	+		ABIE53_003492	0.24	-1.5
3,920,079	+		ABIE53_003492	0.24	+1.9
3,920,079	+		ABIE53_003492	0.24	+0.3
3,920,079	+		ABIE53_003492	0.24	+0.9
3,920,079	+		ABIE53_003492	0.24	-1.3
3,920,079	+		ABIE53_003492	0.24	+0.4
3,920,079	+		ABIE53_003492	0.24	-1.1
3,920,079	+		ABIE53_003492	0.24	-0.1
3,920,079	+		ABIE53_003492	0.24	+0.5
3,920,079	+		ABIE53_003492	0.24	+0.3
3,920,079	+		ABIE53_003492	0.24	+2.2
3,920,080	-		ABIE53_003492	0.25	+0.0
3,920,080	-		ABIE53_003492	0.25	-0.4
3,920,080	-		ABIE53_003492	0.25	+0.3
3,920,080	-		ABIE53_003492	0.25	+2.2
3,920,080	-		ABIE53_003492	0.25	+0.9
3,920,080	-		ABIE53_003492	0.25	+0.3
3,920,080	-		ABIE53_003492	0.25	-1.7
3,920,080	-		ABIE53_003492	0.25	-1.3
3,920,157	+		ABIE53_003492	0.57	-2.2
3,920,157	+		ABIE53_003492	0.57	+0.5
3,920,158	-		ABIE53_003492	0.57	-0.6
3,920,163	+		ABIE53_003492	0.59	-0.6
3,920,163	+		ABIE53_003492	0.59	+0.1
3,920,163	+		ABIE53_003492	0.59	+1.3
3,920,163	+		ABIE53_003492	0.59	-2.2
3,920,163	+		ABIE53_003492	0.59	+0.1
3,920,163	+		ABIE53_003492	0.59	-0.5
3,920,163	+		ABIE53_003492	0.59	-0.7
3,920,163	+		ABIE53_003492	0.59	-0.8
3,920,163	+		ABIE53_003492	0.59	-0.4
3,920,163	+		ABIE53_003492	0.59	+0.2
3,920,164	-		ABIE53_003492	0.60	-0.7
3,920,164	-		ABIE53_003492	0.60	+2.5
3,920,164	-		ABIE53_003492	0.60	-1.1
3,920,164	-		ABIE53_003492	0.60	+0.9
3,920,164	-		ABIE53_003492	0.60	-1.5
3,920,164	-		ABIE53_003492	0.60	+1.1
3,920,164	-		ABIE53_003492	0.60	-0.2
3,920,164	-		ABIE53_003492	0.60	-0.1
3,920,164	-		ABIE53_003492	0.60	-2.0
3,920,164	-		ABIE53_003492	0.60	-0.9
3,920,180	-		ABIE53_003492	0.66	+0.4
3,920,180	-		ABIE53_003492	0.66	+0.3
3,920,180	-		ABIE53_003492	0.66	-1.8
3,920,180	-		ABIE53_003492	0.66	-0.6
3,920,215	-		ABIE53_003492	0.81	+0.5
3,920,251	-				-0.9
3,920,261	-				+0.2
3,920,297	+				+0.6
3,920,298	-				-1.7
3,920,346	+				-0.1
3,920,346	+				-0.7
3,920,346	+				-0.3
3,920,346	+				-0.1
3,920,346	+				+0.4
3,920,346	+				+0.9
3,920,346	+				+0.3
3,920,346	+				-0.7
3,920,346	+				-0.1
3,920,346	+				-0.9
3,920,346	+				+1.0
3,920,347	-				-0.2
3,920,347	-				+1.7
3,920,347	-				-0.5
3,920,347	-				+0.9
3,920,347	-				-2.1
3,920,347	-				+3.1
3,920,347	-				-0.1
3,920,349	+				+0.7
3,920,349	+				-0.2
3,920,349	+				-0.6
3,920,349	+				-0.2
3,920,350	-				-2.9
3,920,350	-				+0.3
3,920,368	+				-2.5
3,920,467	+		ABIE53_003493	0.14	-0.5
3,920,527	-		ABIE53_003493	0.25	-0.5
3,920,689	+		ABIE53_003493	0.55	+0.9
3,920,929	+				+0.4
3,920,929	+				-1.9
3,920,929	+				-0.6
3,920,930	-				+1.5
3,920,930	-				+0.5
3,920,930	-				+1.1
3,920,930	-				+0.4
3,920,930	-				-0.7
3,920,930	-				-1.3
3,920,930	-				+0.4
3,920,952	+				+1.3
3,920,952	+				-0.6
3,920,952	+				+0.6
3,920,952	+				-0.6
3,921,062	-		ABIE53_003494	0.13	-0.1
3,921,091	+		ABIE53_003494	0.18	-2.8
3,921,091	+		ABIE53_003494	0.18	-0.5
3,921,091	+		ABIE53_003494	0.18	+0.3
3,921,091	+		ABIE53_003494	0.18	+0.3
3,921,091	+		ABIE53_003494	0.18	-1.1
3,921,092	-		ABIE53_003494	0.18	-2.7
3,921,167	-		ABIE53_003494	0.31	-0.1
3,921,466	+		ABIE53_003494	0.82	-0.5
3,921,467	-		ABIE53_003494	0.83	+0.9
3,921,677	+				+0.4
3,921,677	+				-0.1
3,921,678	-				+0.4
3,921,678	-				+0.5
3,921,678	-				-0.4
3,921,678	-				+0.3
3,921,678	-				+0.4
3,921,678	-				+0.1
3,921,678	-				+2.3
3,921,797	+		ABIE53_003495	0.10	-1.1
3,921,797	+		ABIE53_003495	0.10	-0.1
3,921,797	+		ABIE53_003495	0.10	-0.5
3,921,798	-		ABIE53_003495	0.10	-0.7
3,921,798	-		ABIE53_003495	0.10	-0.9
3,921,879	+		ABIE53_003495	0.18	+0.3
3,921,879	+		ABIE53_003495	0.18	+0.9
3,921,879	+		ABIE53_003495	0.18	-0.5
3,921,879	+		ABIE53_003495	0.18	+1.5
3,921,879	+		ABIE53_003495	0.18	-1.3
3,921,880	-		ABIE53_003495	0.18	-1.1
3,921,926	-		ABIE53_003495	0.22	-0.9