Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001941

Experiment: RCH2_defined_glucose_5mM with Salicylic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Salicylic 5 mM
2,194,217	+		ABIE53_001940	0.70	+0.2
2,194,217	+		ABIE53_001940	0.70	+0.5
2,194,218	-		ABIE53_001940	0.70	+2.2
2,194,218	-		ABIE53_001940	0.70	+1.2
2,194,445	+		ABIE53_001940	0.79	-0.8
2,194,446	-		ABIE53_001940	0.79	-0.5
2,194,446	-		ABIE53_001940	0.79	+0.6
2,194,446	-		ABIE53_001940	0.79	-0.2
2,194,446	-		ABIE53_001940	0.79	+0.7
2,194,475	+		ABIE53_001940	0.81	-1.7
2,194,586	+		ABIE53_001940	0.85	+0.3
2,194,958	+				-1.5
2,194,997	-				+0.8
2,195,054	+				-0.4
2,195,055	-				-1.0
2,195,055	-				+0.9
2,195,055	-				-0.8
2,195,127	-				+0.0
2,195,159	+				-0.7
2,195,159	+				-0.4
2,195,159	+				-0.3
2,195,159	+				+1.3
2,195,159	+				-1.5
2,195,160	-				+2.5
2,195,160	-				-0.4
2,195,160	-				+0.8
2,195,207	+				-0.3
2,195,207	+				+2.8
2,195,207	+				+2.0
2,195,208	-				+1.2
2,195,208	-				+0.2
2,195,208	-				-1.0
2,195,208	-				+0.6
2,195,234	+				-0.5
2,195,234	+				+0.2
2,195,234	+				+0.2
2,195,234	+				-0.8
2,195,234	+				+1.2
2,195,234	+				+0.2
2,195,235	-				-0.2
2,195,235	-				-0.5
2,195,235	-				-1.5
2,195,236	+				+0.2
2,195,237	-				+1.2
2,195,296	+		ABIE53_001941	0.11	+0.2
2,195,296	+		ABIE53_001941	0.11	-1.0
2,195,297	-		ABIE53_001941	0.11	-0.5
2,195,299	+		ABIE53_001941	0.11	+0.3
2,195,300	-		ABIE53_001941	0.11	-0.4
2,195,300	-		ABIE53_001941	0.11	-1.4
2,195,300	-		ABIE53_001941	0.11	-0.7
2,195,668	+		ABIE53_001941	0.61	-2.4
2,195,668	+		ABIE53_001941	0.61	+1.8
2,195,668	+		ABIE53_001941	0.61	+1.0
2,195,668	+		ABIE53_001941	0.61	-0.2
2,195,669	-		ABIE53_001941	0.61	-1.4
2,195,669	-		ABIE53_001941	0.61	-0.9
2,195,669	-		ABIE53_001941	0.61	-1.4
2,195,669	-		ABIE53_001941	0.61	+1.8
2,195,903	+				-1.0
2,195,904	-				+1.8
2,195,956	+				-0.2
2,195,993	+				-1.3
2,196,003	+				-0.7
2,196,690	+				+0.6
2,196,814	+				-0.7
2,196,814	+				-0.7
2,196,814	+				-0.2
2,196,814	+				-1.5
2,196,815	-				+0.9
2,196,815	-				+0.4
2,196,815	-				+0.8
2,196,815	-				+0.6
2,196,874	-				-1.2
2,196,886	+				+0.2