Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001149

Experiment: RCH2_defined_glucose_5mM with Salicylic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Salicylic 5 mM
1,275,085	+		ABIE53_001148	0.30	-2.0
1,275,085	+		ABIE53_001148	0.30	-2.3
1,275,086	-		ABIE53_001148	0.31	-0.8
1,275,086	-		ABIE53_001148	0.31	-1.7
1,275,086	-		ABIE53_001148	0.31	-0.8
1,275,136	+		ABIE53_001148	0.35	-0.6
1,275,148	+		ABIE53_001148	0.36	-4.0
1,275,148	+		ABIE53_001148	0.36	-1.8
1,275,148	+		ABIE53_001148	0.36	-1.3
1,275,148	+		ABIE53_001148	0.36	-1.3
1,275,149	-		ABIE53_001148	0.36	-1.1
1,275,149	-		ABIE53_001148	0.36	-1.3
1,275,316	+		ABIE53_001148	0.49	-0.9
1,275,316	+		ABIE53_001148	0.49	-1.8
1,275,316	+		ABIE53_001148	0.49	+1.7
1,275,316	+		ABIE53_001148	0.49	-3.5
1,275,316	+		ABIE53_001148	0.49	-5.0
1,275,317	-		ABIE53_001148	0.49	-1.4
1,275,340	+		ABIE53_001148	0.51	-2.1
1,275,340	+		ABIE53_001148	0.51	-0.7
1,275,341	-		ABIE53_001148	0.51	-0.8
1,275,341	-		ABIE53_001148	0.51	-2.3
1,275,361	+		ABIE53_001148	0.53	-2.6
1,275,361	+		ABIE53_001148	0.53	-3.5
1,275,361	+		ABIE53_001148	0.53	-2.1
1,275,361	+		ABIE53_001148	0.53	-3.1
1,275,361	+		ABIE53_001148	0.53	-1.7
1,275,361	+		ABIE53_001148	0.53	-2.3
1,275,362	-		ABIE53_001148	0.53	-0.3
1,275,362	-		ABIE53_001148	0.53	-1.7
1,275,362	-		ABIE53_001148	0.53	-0.6
1,275,362	-		ABIE53_001148	0.53	-1.3
1,275,416	+		ABIE53_001148	0.57	-2.0
1,275,416	+		ABIE53_001148	0.57	-0.3
1,275,416	+		ABIE53_001148	0.57	+0.2
1,275,417	-		ABIE53_001148	0.57	-4.3
1,275,469	+		ABIE53_001148	0.62	-0.3
1,275,469	+		ABIE53_001148	0.62	-0.6
1,275,469	+		ABIE53_001148	0.62	-2.2
1,275,470	-		ABIE53_001148	0.62	-1.8
1,275,470	-		ABIE53_001148	0.62	-1.4
1,275,470	-		ABIE53_001148	0.62	-0.8
1,275,470	-		ABIE53_001148	0.62	-2.5
1,275,498	+		ABIE53_001148	0.64	-1.7
1,275,498	+		ABIE53_001148	0.64	-0.3
1,275,498	+		ABIE53_001148	0.64	-0.6
1,275,498	+		ABIE53_001148	0.64	-2.3
1,275,515	-		ABIE53_001148	0.65	-1.8
1,275,515	-		ABIE53_001148	0.65	-2.1
1,275,515	-		ABIE53_001148	0.65	-1.7
1,275,573	+		ABIE53_001148	0.70	-1.8
1,275,708	+		ABIE53_001148	0.81	-1.4
1,275,763	+		ABIE53_001148	0.86	+0.7
1,275,763	+		ABIE53_001148	0.86	-2.0
1,275,763	+		ABIE53_001148	0.86	-1.6
1,275,763	+		ABIE53_001148	0.86	-0.3
1,275,764	-		ABIE53_001148	0.86	-2.1
1,275,764	-		ABIE53_001148	0.86	-2.4
1,275,764	-		ABIE53_001148	0.86	-0.3
1,275,764	-		ABIE53_001148	0.86	-2.2
1,275,937	+				-0.1
1,275,938	-				-1.1
1,276,016	-		ABIE53_001149	0.10	-1.3
1,276,016	-		ABIE53_001149	0.10	-3.7
1,276,050	+		ABIE53_001149	0.16	-1.3
1,276,050	+		ABIE53_001149	0.16	-1.3
1,276,050	+		ABIE53_001149	0.16	-2.0
1,276,050	+		ABIE53_001149	0.16	+0.7
1,276,050	+		ABIE53_001149	0.16	-3.2
1,276,051	-		ABIE53_001149	0.16	-1.3
1,276,121	+		ABIE53_001149	0.28	-1.1
1,276,122	-		ABIE53_001149	0.28	-0.8
1,276,172	+		ABIE53_001149	0.37	+0.7
1,276,173	-		ABIE53_001149	0.37	-2.1
1,276,189	-		ABIE53_001149	0.40	-0.6
1,276,194	+		ABIE53_001149	0.41	-3.7
1,276,195	-		ABIE53_001149	0.41	-2.4
1,276,195	-		ABIE53_001149	0.41	-4.2
1,276,218	-		ABIE53_001149	0.45	-1.6
1,276,248	+		ABIE53_001149	0.50	-1.6
1,276,249	-		ABIE53_001149	0.50	-2.4
1,276,431	+		ABIE53_001149	0.82	-1.8
1,276,503	+				-1.8
1,276,504	-				+0.2
1,276,504	-				-1.4
1,276,634	+				-1.7
1,276,635	-				-2.5
1,276,656	+				-1.1
1,276,656	+				-2.5
1,276,657	-				-1.7
1,276,672	-				-1.3
1,276,672	-				+0.7
1,276,672	-				-1.3
1,276,798	-		ABIE53_001150	0.19	-1.1
1,276,875	+		ABIE53_001150	0.28	-1.4
1,276,876	-		ABIE53_001150	0.28	-3.5
1,276,876	-		ABIE53_001150	0.28	-0.3
1,276,876	-		ABIE53_001150	0.28	-1.7
1,276,876	-		ABIE53_001150	0.28	-2.5
1,277,144	-		ABIE53_001150	0.56	-2.6
1,277,144	-		ABIE53_001150	0.56	-2.2
1,277,178	+		ABIE53_001150	0.60	-2.7
1,277,179	-		ABIE53_001150	0.60	-2.3
1,277,179	-		ABIE53_001150	0.60	-2.9
1,277,252	+		ABIE53_001150	0.68	-2.1
1,277,253	-		ABIE53_001150	0.68	-0.8
1,277,341	+		ABIE53_001150	0.78	+0.7
1,277,342	-		ABIE53_001150	0.78	-0.6
1,277,362	+		ABIE53_001150	0.80	-1.1
1,277,465	+				-2.0
1,277,491	-				-0.6