Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002132

Experiment: RCH2_defined_glucose_5mM with Pyridoxal 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Pyridoxal 1 mM
2,386,482	+		ABIE53_002131	0.19	+2.9
2,386,483	-		ABIE53_002131	0.19	+1.9
2,386,705	-		ABIE53_002131	0.38	+1.6
2,386,877	-		ABIE53_002131	0.54	-0.8
2,387,134	+		ABIE53_002131	0.76	-0.1
2,387,135	-		ABIE53_002131	0.76	+0.8
2,387,135	-		ABIE53_002131	0.76	+0.0
2,387,135	-		ABIE53_002131	0.76	+0.5
2,387,135	-		ABIE53_002131	0.76	+1.3
2,387,153	+		ABIE53_002131	0.78	-0.3
2,387,155	+		ABIE53_002131	0.78	+0.5
2,387,156	-		ABIE53_002131	0.78	+1.3
2,387,166	+		ABIE53_002131	0.79	-0.3
2,387,167	-		ABIE53_002131	0.79	+0.0
2,387,167	-		ABIE53_002131	0.79	+2.3
2,387,173	+		ABIE53_002131	0.79	-1.7
2,387,174	-		ABIE53_002131	0.80	-1.1
2,387,174	-		ABIE53_002131	0.80	+0.5
2,387,344	+				-0.9
2,387,344	+				-0.6
2,387,345	-				+0.7
2,387,345	-				-0.4
2,387,523	+		ABIE53_002132	0.18	+1.7
2,387,524	-		ABIE53_002132	0.18	+1.6
2,387,531	+		ABIE53_002132	0.19	+1.0
2,387,531	+		ABIE53_002132	0.19	+0.1
2,387,531	+		ABIE53_002132	0.19	-0.8
2,387,532	-		ABIE53_002132	0.19	+1.3
2,387,532	-		ABIE53_002132	0.19	-1.7
2,387,556	+		ABIE53_002132	0.22	+0.2
2,387,570	+		ABIE53_002132	0.24	-0.1
2,387,570	+		ABIE53_002132	0.24	+1.5
2,387,571	-		ABIE53_002132	0.25	+0.2
2,387,636	+		ABIE53_002132	0.34	+0.7
2,387,636	+		ABIE53_002132	0.34	-1.3
2,387,657	+		ABIE53_002132	0.37	+0.0
2,387,657	+		ABIE53_002132	0.37	+0.2
2,387,657	+		ABIE53_002132	0.37	+1.7
2,387,776	+		ABIE53_002132	0.55	-0.5
2,387,776	+		ABIE53_002132	0.55	-0.1
2,387,776	+		ABIE53_002132	0.55	-2.0
2,387,777	-		ABIE53_002132	0.55	-0.1
2,387,777	-		ABIE53_002132	0.55	+0.7
2,387,777	-		ABIE53_002132	0.55	+2.3
2,387,870	+		ABIE53_002132	0.69	-1.4
2,387,870	+		ABIE53_002132	0.69	+0.2
2,387,870	+		ABIE53_002132	0.69	-0.6
2,387,901	-		ABIE53_002132	0.73	+2.3
2,387,909	+		ABIE53_002132	0.74	-1.8
2,387,909	+		ABIE53_002132	0.74	+1.0
2,387,909	+		ABIE53_002132	0.74	+0.9
2,387,924	+		ABIE53_002132	0.77	+1.0
2,387,925	-		ABIE53_002132	0.77	-0.3
2,387,925	-		ABIE53_002132	0.77	-0.7
2,387,940	-		ABIE53_002132	0.79	-0.1
2,387,940	-		ABIE53_002132	0.79	+2.7
2,388,092	-				-2.1
2,388,122	-				-1.8
2,388,123	+				+2.3
2,388,123	+				-0.5
2,388,199	+				-0.7
2,388,200	-				-0.5
2,388,241	+				-0.5
2,388,242	-				+0.3
2,388,243	-				+1.1
2,388,672	-		ABIE53_002133	0.52	-0.3
2,388,788	-		ABIE53_002133	0.65	-0.8
2,388,930	-		ABIE53_002133	0.81	-0.3
2,389,070	+				-1.5
2,389,071	-				+1.5