Experiment: RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08605 and BWI76_RS08610 are separated by 328 nucleotides BWI76_RS08610 and BWI76_RS08615 overlap by 7 nucleotides
BWI76_RS08605: BWI76_RS08605 - phosphoglyceromutase, at 1,815,003 to 1,815,755
_RS08605
BWI76_RS08610: BWI76_RS08610 - galactose-1-epimerase, at 1,816,084 to 1,817,127
_RS08610
BWI76_RS08615: BWI76_RS08615 - galactokinase, at 1,817,121 to 1,818,269
_RS08615
Position (kb)
1816
1817
1818 Strain fitness (log2 ratio)
-1
0
1
2 at 1815.204 kb on - strand, within BWI76_RS08605 at 1815.288 kb on - strand, within BWI76_RS08605 at 1815.423 kb on - strand, within BWI76_RS08605 at 1815.890 kb on + strand at 1815.950 kb on + strand at 1815.956 kb on + strand at 1815.959 kb on - strand at 1815.992 kb on - strand at 1815.993 kb on - strand at 1816.223 kb on + strand, within BWI76_RS08610 at 1816.238 kb on - strand, within BWI76_RS08610 at 1816.279 kb on - strand, within BWI76_RS08610 at 1816.305 kb on - strand, within BWI76_RS08610 at 1816.344 kb on - strand, within BWI76_RS08610 at 1816.479 kb on - strand, within BWI76_RS08610 at 1817.119 kb on + strand at 1817.129 kb on + strand at 1817.309 kb on + strand, within BWI76_RS08615 at 1817.583 kb on - strand, within BWI76_RS08615 at 1817.583 kb on - strand, within BWI76_RS08615 at 1817.737 kb on + strand, within BWI76_RS08615 at 1817.997 kb on + strand, within BWI76_RS08615
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x remove 1,815,204 - BWI76_RS08605 0.27 -0.2 1,815,288 - BWI76_RS08605 0.38 -0.1 1,815,423 - BWI76_RS08605 0.56 +0.9 1,815,890 + +0.1 1,815,950 + +0.0 1,815,956 + -0.6 1,815,959 - +0.6 1,815,992 - +0.1 1,815,993 - +0.2 1,816,223 + BWI76_RS08610 0.13 -0.5 1,816,238 - BWI76_RS08610 0.15 -0.3 1,816,279 - BWI76_RS08610 0.19 +0.3 1,816,305 - BWI76_RS08610 0.21 +0.2 1,816,344 - BWI76_RS08610 0.25 -0.4 1,816,479 - BWI76_RS08610 0.38 +0.3 1,817,119 + +0.3 1,817,129 + +0.0 1,817,309 + BWI76_RS08615 0.16 +1.8 1,817,583 - BWI76_RS08615 0.40 +1.4 1,817,583 - BWI76_RS08615 0.40 +1.8 1,817,737 + BWI76_RS08615 0.54 +1.3 1,817,997 + BWI76_RS08615 0.76 +2.0
Or see this region's nucleotide sequence