Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001133

Experiment: RCH2_defined_glucose_5mM with Pyridoxal 0.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Pyridoxal 0.5 mM
1,254,905	-		ABIE53_001132	0.38	-0.6
1,254,964	-		ABIE53_001132	0.42	+0.7
1,255,153	+		ABIE53_001132	0.57	+0.3
1,255,153	+		ABIE53_001132	0.57	-0.2
1,255,153	+		ABIE53_001132	0.57	-0.5
1,255,153	+		ABIE53_001132	0.57	-0.2
1,255,153	+		ABIE53_001132	0.57	-0.3
1,255,153	+		ABIE53_001132	0.57	-1.3
1,255,153	+		ABIE53_001132	0.57	-0.7
1,255,153	+		ABIE53_001132	0.57	-0.0
1,255,153	+		ABIE53_001132	0.57	-0.0
1,255,153	+		ABIE53_001132	0.57	-0.7
1,255,153	+		ABIE53_001132	0.57	-1.3
1,255,153	+		ABIE53_001132	0.57	+0.7
1,255,154	-		ABIE53_001132	0.57	+0.3
1,255,154	-		ABIE53_001132	0.57	+0.2
1,255,154	-		ABIE53_001132	0.57	-0.4
1,255,154	-		ABIE53_001132	0.57	+0.8
1,255,154	-		ABIE53_001132	0.57	+1.7
1,255,154	-		ABIE53_001132	0.57	+0.0
1,255,154	-		ABIE53_001132	0.57	+0.1
1,255,154	-		ABIE53_001132	0.57	+1.7
1,255,154	-		ABIE53_001132	0.57	-0.7
1,255,154	-		ABIE53_001132	0.57	-0.1
1,255,154	-		ABIE53_001132	0.57	+0.7
1,255,186	+		ABIE53_001132	0.60	-0.1
1,255,186	+		ABIE53_001132	0.60	+0.2
1,255,187	-		ABIE53_001132	0.60	-0.8
1,255,336	+		ABIE53_001132	0.71	-0.9
1,255,337	-		ABIE53_001132	0.71	-0.3
1,255,406	+		ABIE53_001132	0.77	+0.9
1,255,406	+		ABIE53_001132	0.77	+1.7
1,255,406	+		ABIE53_001132	0.77	-0.2
1,255,407	-		ABIE53_001132	0.77	-0.7
1,255,407	-		ABIE53_001132	0.77	-0.3
1,255,407	-		ABIE53_001132	0.77	+0.1
1,255,416	+		ABIE53_001132	0.77	+1.1
1,255,426	+		ABIE53_001132	0.78	+0.1
1,255,426	+		ABIE53_001132	0.78	-1.9
1,255,427	-		ABIE53_001132	0.78	+1.0
1,255,427	-		ABIE53_001132	0.78	+0.3
1,255,427	-		ABIE53_001132	0.78	+0.7
1,255,434	+		ABIE53_001132	0.79	-0.4
1,255,434	+		ABIE53_001132	0.79	-0.9
1,255,434	+		ABIE53_001132	0.79	+0.0
1,255,434	+		ABIE53_001132	0.79	-0.2
1,255,434	+		ABIE53_001132	0.79	+0.4
1,255,434	+		ABIE53_001132	0.79	+0.1
1,255,434	+		ABIE53_001132	0.79	-0.6
1,255,434	+		ABIE53_001132	0.79	-0.6
1,255,434	+		ABIE53_001132	0.79	-0.3
1,255,434	+		ABIE53_001132	0.79	+0.4
1,255,434	+		ABIE53_001132	0.79	+1.5
1,255,434	+		ABIE53_001132	0.79	-0.9
1,255,434	+		ABIE53_001132	0.79	-1.3
1,255,434	+		ABIE53_001132	0.79	+0.1
1,255,434	+		ABIE53_001132	0.79	+0.1
1,255,435	-		ABIE53_001132	0.79	-0.4
1,255,435	-		ABIE53_001132	0.79	+1.2
1,255,435	-		ABIE53_001132	0.79	-0.3
1,255,435	-		ABIE53_001132	0.79	-0.9
1,255,435	-		ABIE53_001132	0.79	-0.8
1,255,435	-		ABIE53_001132	0.79	+0.3
1,255,435	-		ABIE53_001132	0.79	+0.8
1,255,435	-		ABIE53_001132	0.79	-0.5
1,255,435	-		ABIE53_001132	0.79	-1.5
1,255,435	-		ABIE53_001132	0.79	-1.2
1,255,435	-		ABIE53_001132	0.79	+0.1
1,255,435	-		ABIE53_001132	0.79	-1.5
1,255,435	-		ABIE53_001132	0.79	+1.2
1,255,435	-		ABIE53_001132	0.79	-0.6
1,255,435	-		ABIE53_001132	0.79	-1.0
1,255,438	+		ABIE53_001132	0.79	-0.5
1,255,438	+		ABIE53_001132	0.79	+1.1
1,255,438	+		ABIE53_001132	0.79	+1.2
1,255,438	+		ABIE53_001132	0.79	+0.9
1,255,438	+		ABIE53_001132	0.79	-0.3
1,255,438	+		ABIE53_001132	0.79	-0.2
1,255,438	+		ABIE53_001132	0.79	+1.7
1,255,438	+		ABIE53_001132	0.79	+0.2
1,255,438	+		ABIE53_001132	0.79	+0.3
1,255,438	+		ABIE53_001132	0.79	+0.2
1,255,439	-		ABIE53_001132	0.79	-1.9
1,255,439	-		ABIE53_001132	0.79	-1.7
1,255,439	-		ABIE53_001132	0.79	-0.0
1,255,439	-		ABIE53_001132	0.79	-0.7
1,255,439	-		ABIE53_001132	0.79	+0.1
1,255,439	-		ABIE53_001132	0.79	+0.8
1,255,439	-		ABIE53_001132	0.79	-0.6
1,255,439	-		ABIE53_001132	0.79	+0.5
1,255,439	-		ABIE53_001132	0.79	-0.9
1,255,439	-		ABIE53_001132	0.79	-0.3
1,255,439	-		ABIE53_001132	0.79	-0.2
1,255,439	-		ABIE53_001132	0.79	+0.4
1,255,439	-		ABIE53_001132	0.79	+2.7
1,255,439	-		ABIE53_001132	0.79	-0.8
1,255,439	-		ABIE53_001132	0.79	-0.6
1,255,439	-		ABIE53_001132	0.79	+0.2
1,255,439	-		ABIE53_001132	0.79	-0.9
1,255,439	-		ABIE53_001132	0.79	-0.3
1,255,458	+		ABIE53_001132	0.81	-0.2
1,255,458	+		ABIE53_001132	0.81	+0.5
1,255,458	+		ABIE53_001132	0.81	+0.2
1,255,459	-		ABIE53_001132	0.81	+0.1
1,255,459	-		ABIE53_001132	0.81	-0.3
1,255,459	-		ABIE53_001132	0.81	+0.3
1,255,498	-		ABIE53_001132	0.84	-1.2
1,255,498	-		ABIE53_001132	0.84	-0.1
1,255,684	+				+1.0
1,255,684	+				-0.4
1,255,684	+				-1.8
1,255,684	+				+1.7
1,255,684	+				+0.6
1,255,684	+				+0.1
1,255,684	+				-0.3
1,255,684	+				-0.5
1,255,684	+				-1.0
1,255,684	+				+0.2
1,255,684	+				+1.7
1,255,685	-				-0.3
1,255,685	-				+2.0
1,255,685	-				+1.2
1,255,685	-				-0.4
1,255,685	-				+1.3
1,255,685	-				+0.4
1,255,685	-				+1.3
1,255,685	-				-0.2
1,255,685	-				-0.0
1,255,685	-				-1.6
1,255,703	+				+0.4
1,255,703	+				+0.8
1,256,033	+		ABIE53_001133	0.24	-0.4
1,256,033	+		ABIE53_001133	0.24	-0.6
1,256,034	-		ABIE53_001133	0.25	+0.9
1,256,080	+		ABIE53_001133	0.28	+0.7
1,256,080	+		ABIE53_001133	0.28	-0.9
1,256,080	+		ABIE53_001133	0.28	-0.4
1,256,081	-		ABIE53_001133	0.28	+0.2
1,256,081	-		ABIE53_001133	0.28	+0.7
1,256,222	-		ABIE53_001133	0.39	-0.3
1,256,222	-		ABIE53_001133	0.39	-2.7
1,256,233	+		ABIE53_001133	0.40	+0.1
1,256,233	+		ABIE53_001133	0.40	+0.7
1,256,233	+		ABIE53_001133	0.40	+1.2
1,256,233	+		ABIE53_001133	0.40	-0.2
1,256,233	+		ABIE53_001133	0.40	-0.7
1,256,234	-		ABIE53_001133	0.40	+0.3
1,256,234	-		ABIE53_001133	0.40	+0.1
1,256,234	-		ABIE53_001133	0.40	+0.2
1,256,269	+		ABIE53_001133	0.43	-0.7
1,256,270	-		ABIE53_001133	0.43	+0.7
1,256,364	+		ABIE53_001133	0.50	+0.5
1,256,364	+		ABIE53_001133	0.50	+0.2
1,256,364	+		ABIE53_001133	0.50	-2.5
1,256,364	+		ABIE53_001133	0.50	-0.8
1,256,364	+		ABIE53_001133	0.50	-1.2
1,256,365	-		ABIE53_001133	0.50	+1.7
1,256,365	-		ABIE53_001133	0.50	-1.2
1,256,365	-		ABIE53_001133	0.50	-0.0
1,256,365	-		ABIE53_001133	0.50	+1.4
1,256,365	-		ABIE53_001133	0.50	-1.6
1,256,527	+		ABIE53_001133	0.63	+1.3
1,256,527	+		ABIE53_001133	0.63	-1.5
1,256,528	-		ABIE53_001133	0.63	-0.5
1,256,528	-		ABIE53_001133	0.63	+0.6
1,256,528	-		ABIE53_001133	0.63	+0.7
1,256,528	-		ABIE53_001133	0.63	+2.1
1,256,702	+		ABIE53_001133	0.77	+1.9
1,256,703	-		ABIE53_001133	0.77	+0.3
1,256,703	-		ABIE53_001133	0.77	-0.8
1,256,703	-		ABIE53_001133	0.77	+0.7
1,256,913	+				+0.3
1,256,913	+				+0.3
1,256,913	+				+0.9
1,256,913	+				-0.2
1,256,913	+				-0.9
1,256,914	-				+0.1
1,256,914	-				+0.1
1,256,914	-				-1.8
1,256,914	-				-0.3
1,256,914	-				+0.3
1,256,914	-				+0.1
1,256,914	-				-0.6
1,256,914	-				+0.9
1,256,914	-				+1.1
1,256,914	-				-0.3
1,256,914	-				+1.1
1,256,914	-				+0.4
1,256,933	-				+0.1
1,257,018	+				-0.3
1,257,018	+				-1.2
1,257,039	+				+0.7
1,257,039	+				-1.9
1,257,039	+				+0.2
1,257,039	+				-0.0
1,257,039	+				+0.1
1,257,039	+				+1.2
1,257,039	+				+0.9
1,257,039	+				-1.3
1,257,039	+				+1.1
1,257,039	+				-0.7
1,257,040	-				+2.3
1,257,040	-				-0.5
1,257,040	-				+0.2
1,257,040	-				+0.2
1,257,040	-				-0.3
1,257,040	-				-1.7
1,257,070	+				+0.4
1,257,070	+				+0.2
1,257,070	+				+0.2
1,257,070	+				-0.9
1,257,071	-				-0.2
1,257,071	-				-0.7
1,257,071	-				-0.7
1,257,071	-				+3.2
1,257,071	-				-0.7
1,257,079	+				-0.2
1,257,080	-				-1.8
1,257,080	-				+0.4
1,257,080	-				+0.4
1,257,080	-				-0.1
1,257,118	+				-0.1
1,257,119	-				+0.2
1,257,119	-				-0.5
1,257,119	-				-2.5
1,257,122	+				+0.1
1,257,122	+				-0.1
1,257,122	+				-0.3
1,257,122	+				+0.5
1,257,122	+				-1.7
1,257,122	+				-0.2
1,257,122	+				-0.1
1,257,122	+				-0.9
1,257,122	+				-0.5
1,257,122	+				-0.5
1,257,122	+				+0.1
1,257,122	+				-1.5
1,257,122	+				-0.3
1,257,122	+				-0.3
1,257,123	-				+0.1
1,257,123	-				-0.3
1,257,123	-				+0.5
1,257,123	-				+0.7
1,257,270	-		ABIE53_001134	0.20	+1.7
1,257,270	-		ABIE53_001134	0.20	+0.2
1,257,336	+		ABIE53_001134	0.28	-0.6
1,257,336	+		ABIE53_001134	0.28	-1.2
1,257,336	+		ABIE53_001134	0.28	+0.5
1,257,336	+		ABIE53_001134	0.28	+0.7
1,257,336	+		ABIE53_001134	0.28	-0.0
1,257,336	+		ABIE53_001134	0.28	-0.7
1,257,336	+		ABIE53_001134	0.28	+0.1
1,257,336	+		ABIE53_001134	0.28	+0.7
1,257,336	+		ABIE53_001134	0.28	+0.3
1,257,336	+		ABIE53_001134	0.28	-0.5
1,257,336	+		ABIE53_001134	0.28	+0.2
1,257,336	+		ABIE53_001134	0.28	-0.0
1,257,336	+		ABIE53_001134	0.28	-0.1
1,257,336	+		ABIE53_001134	0.28	+0.8
1,257,336	+		ABIE53_001134	0.28	+0.4
1,257,336	+		ABIE53_001134	0.28	+2.3
1,257,336	+		ABIE53_001134	0.28	+2.2
1,257,336	+		ABIE53_001134	0.28	+0.1
1,257,336	+		ABIE53_001134	0.28	+0.6
1,257,336	+		ABIE53_001134	0.28	-0.2
1,257,337	-		ABIE53_001134	0.28	+0.7
1,257,337	-		ABIE53_001134	0.28	-0.7
1,257,337	-		ABIE53_001134	0.28	-0.2
1,257,337	-		ABIE53_001134	0.28	-1.5
1,257,337	-		ABIE53_001134	0.28	-0.3
1,257,337	-		ABIE53_001134	0.28	+2.1
1,257,337	-		ABIE53_001134	0.28	+0.8
1,257,337	-		ABIE53_001134	0.28	+2.1
1,257,337	-		ABIE53_001134	0.28	-0.8
1,257,337	-		ABIE53_001134	0.28	-0.2
1,257,337	-		ABIE53_001134	0.28	+1.7
1,257,428	+		ABIE53_001134	0.38	-0.9
1,257,429	-		ABIE53_001134	0.39	-1.2
1,257,429	-		ABIE53_001134	0.39	-0.3
1,257,429	-		ABIE53_001134	0.39	-1.1
1,257,630	+		ABIE53_001134	0.62	+1.7
1,257,630	+		ABIE53_001134	0.62	-1.3
1,257,630	+		ABIE53_001134	0.62	+0.5
1,257,630	+		ABIE53_001134	0.62	+0.2
1,257,630	+		ABIE53_001134	0.62	-0.0
1,257,630	+		ABIE53_001134	0.62	-0.1
1,257,630	+		ABIE53_001134	0.62	+0.2
1,257,631	-		ABIE53_001134	0.63	-0.3
1,257,631	-		ABIE53_001134	0.63	-0.4
1,257,631	-		ABIE53_001134	0.63	+0.1
1,257,631	-		ABIE53_001134	0.63	+1.8
1,257,631	-		ABIE53_001134	0.63	+0.5
1,257,631	-		ABIE53_001134	0.63	+0.8
1,257,631	-		ABIE53_001134	0.63	+0.4
1,257,631	-		ABIE53_001134	0.63	-0.3
1,257,631	-		ABIE53_001134	0.63	-0.2
1,257,631	-		ABIE53_001134	0.63	-1.0
1,257,631	-		ABIE53_001134	0.63	+1.5
1,257,631	-		ABIE53_001134	0.63	+0.1
1,257,631	-		ABIE53_001134	0.63	-0.7
1,257,631	-		ABIE53_001134	0.63	-1.2
1,257,631	-		ABIE53_001134	0.63	+1.1
1,257,631	-		ABIE53_001134	0.63	-1.7
1,257,631	-		ABIE53_001134	0.63	-1.7
1,257,669	+		ABIE53_001134	0.67	-0.7
1,257,669	+		ABIE53_001134	0.67	+1.1
1,257,669	+		ABIE53_001134	0.67	-1.6
1,257,669	+		ABIE53_001134	0.67	+0.6
1,257,670	-		ABIE53_001134	0.67	-1.7
1,257,670	-		ABIE53_001134	0.67	+0.1
1,257,670	-		ABIE53_001134	0.67	-0.3
1,257,670	-		ABIE53_001134	0.67	-2.0
1,257,670	-		ABIE53_001134	0.67	+0.8
1,257,670	-		ABIE53_001134	0.67	+1.1
1,257,670	-		ABIE53_001134	0.67	+1.1
1,257,670	-		ABIE53_001134	0.67	-1.9
1,257,670	-		ABIE53_001134	0.67	+0.5
1,257,670	-		ABIE53_001134	0.67	-0.8
1,257,670	-		ABIE53_001134	0.67	-0.2
1,257,670	-		ABIE53_001134	0.67	+0.1
1,257,670	-		ABIE53_001134	0.67	+0.7
1,257,671	+		ABIE53_001134	0.67	-0.9
1,257,671	+		ABIE53_001134	0.67	+0.2
1,257,672	-		ABIE53_001134	0.68	-1.3
1,257,672	-		ABIE53_001134	0.68	+0.8
1,257,741	+		ABIE53_001134	0.76	+0.1
1,257,741	+		ABIE53_001134	0.76	-1.8
1,257,741	+		ABIE53_001134	0.76	+0.7
1,257,741	+		ABIE53_001134	0.76	-0.5
1,257,741	+		ABIE53_001134	0.76	-0.2
1,257,741	+		ABIE53_001134	0.76	-0.0
1,257,741	+		ABIE53_001134	0.76	+1.1
1,257,741	+		ABIE53_001134	0.76	+0.1
1,257,741	+		ABIE53_001134	0.76	+0.3
1,257,741	+		ABIE53_001134	0.76	-0.5
1,257,741	+		ABIE53_001134	0.76	+0.2
1,257,741	+		ABIE53_001134	0.76	+0.3
1,257,742	-		ABIE53_001134	0.76	-0.3
1,257,742	-		ABIE53_001134	0.76	+0.9
1,257,742	-		ABIE53_001134	0.76	-0.2
1,257,742	-		ABIE53_001134	0.76	+0.8
1,257,742	-		ABIE53_001134	0.76	+0.7
1,257,742	-		ABIE53_001134	0.76	+0.2
1,257,760	+		ABIE53_001134	0.78	+1.1
1,257,760	+		ABIE53_001134	0.78	+0.8
1,257,760	+		ABIE53_001134	0.78	-1.6
1,257,760	+		ABIE53_001134	0.78	-0.6
1,257,760	+		ABIE53_001134	0.78	-0.3
1,257,761	-		ABIE53_001134	0.78	-0.9
1,257,761	-		ABIE53_001134	0.78	+0.1
1,257,761	-		ABIE53_001134	0.78	+1.0
1,257,976	+				+0.5
1,257,976	+				+0.4
1,257,976	+				-0.5
1,257,976	+				-0.0
1,257,976	+				-0.6
1,257,976	+				-1.3
1,257,976	+				+1.1
1,257,977	-				-2.2
1,257,977	-				+0.9
1,257,977	-				+0.8
1,257,977	-				+0.5
1,257,977	-				-0.4
1,257,977	-				-2.7
1,257,977	-				+1.0