Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29120

Experiment: Sucrose (C) and Glycine betaine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Glycine betaine (N); with TAPS
6,474,938	-				-0.4
6,474,938	-				-0.1
6,474,938	-				+0.7
6,474,938	-				+0.1
6,475,085	+		PFLU_RS29115	0.29	+0.5
6,475,085	+		PFLU_RS29115	0.29	-0.5
6,475,085	+		PFLU_RS29115	0.29	-1.2
6,475,085	+		PFLU_RS29115	0.29	-0.3
6,475,086	-		PFLU_RS29115	0.29	-0.7
6,475,086	-		PFLU_RS29115	0.29	-0.5
6,475,086	-		PFLU_RS29115	0.29	+0.7
6,475,086	-		PFLU_RS29115	0.29	+1.1
6,475,086	-		PFLU_RS29115	0.29	-1.1
6,475,086	-		PFLU_RS29115	0.29	-0.6
6,475,086	-		PFLU_RS29115	0.29	+0.2
6,475,086	-		PFLU_RS29115	0.29	-0.3
6,475,086	-		PFLU_RS29115	0.29	+0.7
6,475,086	-		PFLU_RS29115	0.29	+0.9
6,475,086	-		PFLU_RS29115	0.29	-0.5
6,475,086	-		PFLU_RS29115	0.29	+0.9
6,475,330	+		PFLU_RS29115	0.65	-1.6
6,475,330	+		PFLU_RS29115	0.65	-0.4
6,475,330	+		PFLU_RS29115	0.65	+0.4
6,475,331	-		PFLU_RS29115	0.65	+0.8
6,475,429	-		PFLU_RS29115	0.80	-0.1
6,475,429	-		PFLU_RS29115	0.80	+0.8
6,475,429	-		PFLU_RS29115	0.80	-0.3
6,475,471	+		PFLU_RS29115	0.86	-0.2
6,475,471	+		PFLU_RS29115	0.86	+0.2
6,475,471	+		PFLU_RS29115	0.86	-0.2
6,475,471	+		PFLU_RS29115	0.86	-0.3
6,475,471	+		PFLU_RS29115	0.86	-0.4
6,475,471	+		PFLU_RS29115	0.86	-2.3
6,475,471	+		PFLU_RS29115	0.86	-0.5
6,475,471	+		PFLU_RS29115	0.86	+0.4
6,475,471	+		PFLU_RS29115	0.86	-2.5
6,475,471	+		PFLU_RS29115	0.86	+0.4
6,475,471	+		PFLU_RS29115	0.86	+0.3
6,475,471	+		PFLU_RS29115	0.86	+0.0
6,475,471	+		PFLU_RS29115	0.86	+0.1
6,475,471	+		PFLU_RS29115	0.86	+0.6
6,475,471	+		PFLU_RS29115	0.86	+0.7
6,475,471	+		PFLU_RS29115	0.86	-0.4
6,475,471	+		PFLU_RS29115	0.86	+0.2
6,475,471	+		PFLU_RS29115	0.86	+0.8
6,475,471	+		PFLU_RS29115	0.86	+0.1
6,475,471	+		PFLU_RS29115	0.86	+1.0
6,475,471	+		PFLU_RS29115	0.86	+0.1
6,475,472	-		PFLU_RS29115	0.87	-0.1
6,475,472	-		PFLU_RS29115	0.87	-0.8
6,475,472	-		PFLU_RS29115	0.87	-0.6
6,475,472	-		PFLU_RS29115	0.87	+0.0
6,475,472	-		PFLU_RS29115	0.87	+1.7
6,475,472	-		PFLU_RS29115	0.87	-0.2
6,475,472	-		PFLU_RS29115	0.87	-0.1
6,475,472	-		PFLU_RS29115	0.87	+0.7
6,475,472	-		PFLU_RS29115	0.87	-1.3
6,475,472	-		PFLU_RS29115	0.87	-0.2
6,475,472	-		PFLU_RS29115	0.87	+1.0
6,475,472	-		PFLU_RS29115	0.87	-0.2
6,475,472	-		PFLU_RS29115	0.87	-0.2
6,475,472	-		PFLU_RS29115	0.87	-0.3
6,475,472	-		PFLU_RS29115	0.87	+1.2
6,475,472	-		PFLU_RS29115	0.87	-0.8
6,475,473	+		PFLU_RS29115	0.87	+0.5
6,475,473	+		PFLU_RS29115	0.87	-0.7
6,475,473	+		PFLU_RS29115	0.87	-0.2
6,475,473	+		PFLU_RS29115	0.87	-1.0
6,475,473	+		PFLU_RS29115	0.87	-0.7
6,475,473	+		PFLU_RS29115	0.87	+0.7
6,475,473	+		PFLU_RS29115	0.87	-0.1
6,475,474	-		PFLU_RS29115	0.87	-0.7
6,475,474	-		PFLU_RS29115	0.87	-0.0
6,475,474	-		PFLU_RS29115	0.87	-0.6
6,475,474	-		PFLU_RS29115	0.87	-0.5
6,475,474	-		PFLU_RS29115	0.87	-0.3
6,475,561	+				-0.7
6,475,561	+				-0.7
6,475,561	+				-0.9
6,475,562	-				+0.2
6,475,562	-				-0.2
6,475,562	-				+1.5
6,475,562	-				-0.8
6,475,569	+				-0.6
6,475,569	+				-0.4
6,475,569	+				-1.5
6,475,569	+				+0.7
6,475,569	+				+1.1
6,475,569	+				+1.1
6,475,570	-				-0.3
6,475,570	-				+0.5
6,475,570	-				-1.8
6,475,570	-				+0.3
6,475,570	-				-0.2
6,475,570	-				-0.3
6,475,570	-				-0.5
6,475,570	-				-1.5
6,475,570	-				-0.5
6,475,570	-				-2.0
6,475,570	-				-0.9
6,475,570	-				+0.3
6,475,651	+				+0.9
6,475,651	+				-1.1
6,475,651	+				+0.7
6,475,651	+				-0.2
6,475,652	-				+1.3
6,475,652	-				-0.9
6,475,652	-				-0.6
6,475,652	-				+0.6
6,475,754	+				+0.2
6,475,754	+				+1.7
6,475,774	+				-0.5
6,475,774	+				-0.5
6,475,775	-				-0.1
6,475,775	-				-0.6
6,475,775	-				-0.4
6,475,775	-				+0.0
6,475,775	-				+0.0
6,475,918	+				-2.3
6,475,919	-				-2.3
6,475,949	-				-0.3
6,476,210	+		PFLU_RS29120	0.61	+0.1
6,476,210	+		PFLU_RS29120	0.61	-0.5
6,476,211	-		PFLU_RS29120	0.61	+0.3
6,476,211	-		PFLU_RS29120	0.61	-0.5
6,476,211	-		PFLU_RS29120	0.61	-0.2
6,476,274	+		PFLU_RS29120	0.75	+0.3
6,476,275	-		PFLU_RS29120	0.75	+0.7
6,476,275	-		PFLU_RS29120	0.75	+0.0
6,476,275	-		PFLU_RS29120	0.75	+0.6
6,476,299	+		PFLU_RS29120	0.80	-1.2
6,476,388	+				-0.9
6,476,388	+				-0.0
6,476,388	+				-0.6
6,476,388	+				+0.5
6,476,388	+				+0.6
6,476,388	+				+0.6
6,476,388	+				+1.2
6,476,388	+				+0.3
6,476,388	+				-0.3
6,476,388	+				-0.3
6,476,388	+				+0.2
6,476,388	+				-1.2
6,476,388	+				-1.9
6,476,388	+				-0.1
6,476,389	-				-0.1
6,476,389	-				-0.3
6,476,389	-				-1.1
6,476,389	-				-0.0
6,476,389	-				-0.4
6,476,389	-				+0.3
6,476,389	-				-1.6
6,476,389	-				-0.2
6,476,389	-				-2.0
6,476,389	-				-0.3
6,476,392	+				+1.5
6,476,392	+				-0.1
6,476,392	+				+0.8
6,476,392	+				+1.4
6,476,392	+				-1.4
6,476,392	+				+0.4
6,476,392	+				+0.8
6,476,392	+				-0.4
6,476,392	+				+0.5
6,476,392	+				-0.1
6,476,392	+				+0.3
6,476,392	+				-1.1
6,476,392	+				-1.2
6,476,393	-				+1.2
6,476,393	-				+1.2
6,476,393	-				-0.8
6,476,393	-				+0.1
6,476,393	-				+0.8
6,476,393	-				-0.1
6,476,393	-				-0.8
6,476,393	-				-0.9
6,476,393	-				+0.5
6,476,393	-				-0.4
6,476,393	-				-0.8
6,476,393	-				-0.2
6,476,393	-				-2.0
6,476,434	+				+1.0
6,476,434	+				-1.1
6,476,434	+				-2.5
6,476,434	+				+0.4
6,476,434	+				+1.4
6,476,434	+				-0.3
6,476,435	-				+0.7
6,476,482	+				-1.5
6,476,482	+				-0.1
6,476,483	-				+2.3
6,476,764	+		PFLU_RS29125	0.20	-0.4
6,476,764	+		PFLU_RS29125	0.20	-0.5
6,476,764	+		PFLU_RS29125	0.20	-0.7
6,476,764	+		PFLU_RS29125	0.20	+0.3
6,476,765	-		PFLU_RS29125	0.20	+1.0
6,476,765	-		PFLU_RS29125	0.20	+2.0
6,476,795	-		PFLU_RS29125	0.21	-0.2
6,476,795	-		PFLU_RS29125	0.21	+1.4
6,476,863	+		PFLU_RS29125	0.25	+0.6
6,476,863	+		PFLU_RS29125	0.25	-1.1
6,476,863	+		PFLU_RS29125	0.25	-0.8
6,476,863	+		PFLU_RS29125	0.25	+0.2
6,476,863	+		PFLU_RS29125	0.25	+1.3
6,476,863	+		PFLU_RS29125	0.25	-0.0
6,476,863	+		PFLU_RS29125	0.25	+0.5
6,476,863	+		PFLU_RS29125	0.25	+1.1
6,476,864	-		PFLU_RS29125	0.25	-2.2
6,476,864	-		PFLU_RS29125	0.25	+2.6
6,476,864	-		PFLU_RS29125	0.25	-0.3
6,476,864	-		PFLU_RS29125	0.25	+0.6
6,476,864	-		PFLU_RS29125	0.25	-0.1
6,476,864	-		PFLU_RS29125	0.25	-1.2
6,476,992	+		PFLU_RS29125	0.32	-0.7
6,476,992	+		PFLU_RS29125	0.32	+0.6
6,476,992	+		PFLU_RS29125	0.32	-0.6
6,476,992	+		PFLU_RS29125	0.32	+0.1
6,476,992	+		PFLU_RS29125	0.32	+0.2
6,476,992	+		PFLU_RS29125	0.32	-0.4
6,476,992	+		PFLU_RS29125	0.32	+0.1
6,476,992	+		PFLU_RS29125	0.32	-0.4
6,476,992	+		PFLU_RS29125	0.32	-0.5
6,476,993	-		PFLU_RS29125	0.32	+0.4
6,476,993	-		PFLU_RS29125	0.32	-0.3
6,476,993	-		PFLU_RS29125	0.32	-0.2
6,476,993	-		PFLU_RS29125	0.32	-0.7
6,476,993	-		PFLU_RS29125	0.32	+0.0
6,476,993	-		PFLU_RS29125	0.32	-1.0
6,476,993	-		PFLU_RS29125	0.32	-0.3
6,476,993	-		PFLU_RS29125	0.32	-0.1
6,476,993	-		PFLU_RS29125	0.32	+0.3
6,476,993	-		PFLU_RS29125	0.32	+0.6
6,476,993	-		PFLU_RS29125	0.32	+0.2
6,477,163	+		PFLU_RS29125	0.41	+0.5
6,477,163	+		PFLU_RS29125	0.41	-0.1
6,477,163	+		PFLU_RS29125	0.41	-0.0
6,477,163	+		PFLU_RS29125	0.41	-0.5
6,477,163	+		PFLU_RS29125	0.41	-0.1
6,477,163	+		PFLU_RS29125	0.41	-1.9
6,477,163	+		PFLU_RS29125	0.41	-1.0
6,477,163	+		PFLU_RS29125	0.41	+0.0
6,477,163	+		PFLU_RS29125	0.41	-0.2
6,477,163	+		PFLU_RS29125	0.41	-1.4
6,477,163	+		PFLU_RS29125	0.41	-0.6
6,477,163	+		PFLU_RS29125	0.41	+0.3
6,477,163	+		PFLU_RS29125	0.41	-0.0
6,477,163	+		PFLU_RS29125	0.41	-1.1
6,477,163	+		PFLU_RS29125	0.41	+0.9
6,477,164	-		PFLU_RS29125	0.41	-0.3
6,477,164	-		PFLU_RS29125	0.41	+0.2
6,477,164	-		PFLU_RS29125	0.41	+0.4
6,477,164	-		PFLU_RS29125	0.41	-0.6
6,477,164	-		PFLU_RS29125	0.41	-0.3
6,477,164	-		PFLU_RS29125	0.41	-1.0
6,477,164	-		PFLU_RS29125	0.41	-0.3
6,477,164	-		PFLU_RS29125	0.41	+0.0
6,477,164	-		PFLU_RS29125	0.41	+1.4
6,477,164	-		PFLU_RS29125	0.41	-2.4
6,477,164	-		PFLU_RS29125	0.41	-1.5
6,477,164	-		PFLU_RS29125	0.41	-0.1
6,477,164	-		PFLU_RS29125	0.41	+1.5
6,477,164	-		PFLU_RS29125	0.41	+0.7
6,477,290	-		PFLU_RS29125	0.47	-0.1
6,477,354	+		PFLU_RS29125	0.51	+0.1
6,477,355	-		PFLU_RS29125	0.51	-1.5
6,477,355	-		PFLU_RS29125	0.51	-0.7
6,477,377	-		PFLU_RS29125	0.52	+0.6