Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS10560

Experiment: Sucrose (C) and Glycine betaine (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Glycine betaine (N); with TAPS
2,325,564	+				-1.7
2,325,564	+				+0.9
2,325,564	+				-0.8
2,325,565	-				-0.6
2,325,567	+				-0.3
2,325,567	+				-0.7
2,325,614	+				-0.9
2,325,614	+				-2.4
2,325,614	+				+0.9
2,325,614	+				+0.8
2,325,614	+				+0.5
2,325,614	+				-0.8
2,325,615	-				-0.3
2,325,615	-				-0.5
2,325,950	+		PFLU_RS10555	0.44	-0.9
2,325,983	+		PFLU_RS10555	0.47	+0.2
2,325,984	-		PFLU_RS10555	0.48	+0.0
2,326,115	-		PFLU_RS10555	0.63	-0.1
2,326,303	+		PFLU_RS10555	0.85	-0.5
2,326,303	+		PFLU_RS10555	0.85	+1.2
2,326,303	+		PFLU_RS10555	0.85	+0.0
2,326,303	+		PFLU_RS10555	0.85	+0.1
2,326,303	+		PFLU_RS10555	0.85	-0.2
2,326,303	+		PFLU_RS10555	0.85	-1.3
2,326,304	-		PFLU_RS10555	0.86	-1.4
2,326,304	-		PFLU_RS10555	0.86	-0.3
2,326,304	-		PFLU_RS10555	0.86	+0.6
2,326,304	-		PFLU_RS10555	0.86	+0.6
2,326,328	+		PFLU_RS10555	0.88	-0.3
2,326,415	+				-0.1
2,326,415	+				+0.9
2,326,415	+				-0.3
2,326,415	+				+0.9
2,326,415	+				+0.3
2,326,415	+				-0.4
2,326,415	+				+1.2
2,326,415	+				-0.3
2,326,415	+				+0.3
2,326,415	+				-1.8
2,326,415	+				-0.5
2,326,415	+				+0.0
2,326,415	+				+0.8
2,326,415	+				-0.5
2,326,415	+				-0.4
2,326,415	+				+1.0
2,326,415	+				+0.6
2,326,415	+				+0.7
2,326,415	+				+0.1
2,326,415	+				+0.6
2,326,415	+				-1.0
2,326,416	-				-1.0
2,326,416	-				+0.5
2,326,416	-				-1.3
2,326,416	-				+0.3
2,326,416	-				+0.2
2,326,416	-				+1.4
2,326,416	-				+0.8
2,326,416	-				+1.0
2,326,416	-				-0.1
2,326,416	-				+0.0
2,326,416	-				-0.7
2,326,416	-				+0.4
2,326,416	-				-0.6
2,326,416	-				-1.4
2,326,416	-				+0.7
2,326,416	-				-0.7
2,326,416	-				+0.8
2,326,416	-				-1.1
2,326,416	-				+0.6
2,326,416	-				-0.2
2,326,423	+				+0.4
2,326,423	+				+0.5
2,326,423	+				-0.6
2,326,423	+				+0.4
2,326,432	-				+0.1
2,326,453	+				+0.1
2,326,453	+				-0.6
2,326,453	+				+0.3
2,326,453	+				-0.7
2,326,453	+				-0.2
2,326,453	+				+0.6
2,326,453	+				-0.7
2,326,454	-				-0.8
2,326,454	-				+0.1
2,326,454	-				-0.2
2,326,454	-				+0.7
2,326,454	-				-0.5
2,326,454	-				-0.0
2,326,454	-				-1.7
2,326,498	+				-0.4
2,326,498	+				-0.4
2,326,499	-				+0.6
2,326,499	-				-0.4
2,326,694	+		PFLU_RS10560	0.16	+0.1
2,326,695	-		PFLU_RS10560	0.16	-1.1
2,326,713	-		PFLU_RS10560	0.18	+0.8
2,326,713	-		PFLU_RS10560	0.18	-1.2
2,326,902	-		PFLU_RS10560	0.37	-0.3
2,326,917	+		PFLU_RS10560	0.38	+1.6
2,326,917	+		PFLU_RS10560	0.38	+0.1
2,326,917	+		PFLU_RS10560	0.38	-0.0
2,326,917	+		PFLU_RS10560	0.38	-0.5
2,326,917	+		PFLU_RS10560	0.38	-1.8
2,327,105	+		PFLU_RS10560	0.58	-0.3
2,327,121	+		PFLU_RS10560	0.59	-0.3
2,327,121	+		PFLU_RS10560	0.59	+0.0
2,327,122	-		PFLU_RS10560	0.59	-0.2
2,327,149	-		PFLU_RS10560	0.62	+1.4
2,327,202	+		PFLU_RS10560	0.68	-1.3
2,327,202	+		PFLU_RS10560	0.68	-0.9
2,327,203	-		PFLU_RS10560	0.68	+0.7
2,327,203	-		PFLU_RS10560	0.68	-0.3
2,327,203	-		PFLU_RS10560	0.68	-0.2
2,327,356	-		PFLU_RS10560	0.83	+2.3
2,327,481	+				+0.0
2,327,481	+				-1.4
2,327,481	+				-0.2
2,327,481	+				+1.0
2,327,481	+				-1.1
2,327,482	-				-0.1
2,327,482	-				+0.4
2,327,482	-				+0.3
2,327,482	-				+0.3
2,327,482	-				+0.8
2,327,482	-				-1.5
2,327,482	-				-0.2
2,327,482	-				+0.2
2,327,482	-				+0.4
2,327,482	-				-0.5
2,327,514	+				-0.1
2,327,514	+				-0.6
2,327,514	+				-0.6
2,327,514	+				-1.4
2,327,514	+				+0.0
2,327,514	+				-0.6
2,327,514	+				-0.4
2,327,514	+				-1.1
2,327,515	-				+0.5
2,327,515	-				-0.3
2,327,515	-				-0.2
2,327,515	-				+0.4
2,327,515	-				-0.3
2,327,515	-				+0.3
2,327,515	-				-0.3
2,327,527	+				+0.4
2,327,528	-				+0.1
2,327,528	-				-0.1
2,327,581	+				+0.5
2,327,581	+				+0.5
2,327,581	+				-0.7
2,327,581	+				-0.1
2,327,581	+				+0.9
2,327,581	+				+0.5
2,327,582	-				+0.2
2,327,582	-				-1.2
2,327,584	+				-0.4
2,327,584	+				+1.0
2,327,584	+				-0.6
2,327,584	+				-2.0
2,327,585	-				+0.8
2,327,585	-				-1.1
2,327,585	-				-0.5
2,327,585	-				+0.3
2,327,585	-				-0.7
2,327,585	-				-0.4
2,327,585	-				-0.5
2,327,585	-				-1.8
2,327,585	-				+1.1
2,327,585	-				-0.8
2,327,641	+				+1.0
2,327,642	-				+2.0
2,327,660	-				+0.3
2,327,706	-				-0.0
2,327,787	+		PFLU_RS10565	0.16	-0.7
2,327,787	+		PFLU_RS10565	0.16	+0.9
2,327,787	+		PFLU_RS10565	0.16	-0.5
2,327,787	+		PFLU_RS10565	0.16	+0.5
2,327,787	+		PFLU_RS10565	0.16	+0.0
2,327,787	+		PFLU_RS10565	0.16	+0.2
2,327,787	+		PFLU_RS10565	0.16	-0.3
2,327,787	+		PFLU_RS10565	0.16	-0.1
2,327,787	+		PFLU_RS10565	0.16	-0.5
2,327,787	+		PFLU_RS10565	0.16	+0.5
2,327,787	+		PFLU_RS10565	0.16	-0.1
2,327,787	+		PFLU_RS10565	0.16	+0.0
2,327,787	+		PFLU_RS10565	0.16	-0.4
2,327,788	-		PFLU_RS10565	0.16	-1.5
2,327,788	-		PFLU_RS10565	0.16	-0.7
2,327,788	-		PFLU_RS10565	0.16	-0.2
2,327,788	-		PFLU_RS10565	0.16	-0.1
2,327,788	-		PFLU_RS10565	0.16	-1.0
2,327,788	-		PFLU_RS10565	0.16	+0.1
2,327,788	-		PFLU_RS10565	0.16	-0.4
2,327,788	-		PFLU_RS10565	0.16	+0.3
2,327,788	-		PFLU_RS10565	0.16	+0.3
2,327,788	-		PFLU_RS10565	0.16	-1.0
2,327,788	-		PFLU_RS10565	0.16	-0.2
2,327,788	-		PFLU_RS10565	0.16	+1.2
2,327,788	-		PFLU_RS10565	0.16	+0.2
2,327,788	-		PFLU_RS10565	0.16	+0.9
2,327,788	-		PFLU_RS10565	0.16	+0.2
2,327,788	-		PFLU_RS10565	0.16	+0.6
2,327,788	-		PFLU_RS10565	0.16	-0.8
2,327,788	-		PFLU_RS10565	0.16	-1.2
2,327,788	-		PFLU_RS10565	0.16	+0.6
2,327,788	-		PFLU_RS10565	0.16	+0.1
2,327,788	-		PFLU_RS10565	0.16	-0.4
2,327,788	-		PFLU_RS10565	0.16	+0.5
2,327,867	+		PFLU_RS10565	0.23	-0.0
2,327,867	+		PFLU_RS10565	0.23	+0.7
2,327,867	+		PFLU_RS10565	0.23	-0.5
2,327,867	+		PFLU_RS10565	0.23	+0.4
2,327,867	+		PFLU_RS10565	0.23	+0.6
2,327,867	+		PFLU_RS10565	0.23	-0.1
2,327,868	-		PFLU_RS10565	0.23	+0.0
2,327,868	-		PFLU_RS10565	0.23	-1.3
2,327,868	-		PFLU_RS10565	0.23	-0.9
2,327,868	-		PFLU_RS10565	0.23	-1.1
2,327,868	-		PFLU_RS10565	0.23	-1.4
2,327,868	-		PFLU_RS10565	0.23	-0.4
2,327,868	-		PFLU_RS10565	0.23	+0.0
2,327,868	-		PFLU_RS10565	0.23	+0.1
2,327,868	-		PFLU_RS10565	0.23	+1.6
2,327,871	+		PFLU_RS10565	0.23	-0.5
2,327,871	+		PFLU_RS10565	0.23	-1.7
2,327,871	+		PFLU_RS10565	0.23	+0.3
2,327,872	-		PFLU_RS10565	0.24	+0.5
2,327,872	-		PFLU_RS10565	0.24	-0.3
2,327,872	-		PFLU_RS10565	0.24	-0.4
2,327,908	+		PFLU_RS10565	0.27	-1.2
2,327,908	+		PFLU_RS10565	0.27	-0.7
2,327,908	+		PFLU_RS10565	0.27	-0.2
2,327,909	-		PFLU_RS10565	0.27	+1.4
2,327,909	-		PFLU_RS10565	0.27	-1.0
2,328,006	+		PFLU_RS10565	0.36	-0.5
2,328,006	+		PFLU_RS10565	0.36	+1.3
2,328,006	+		PFLU_RS10565	0.36	+0.4
2,328,007	-		PFLU_RS10565	0.36	+0.7
2,328,007	-		PFLU_RS10565	0.36	-0.1
2,328,089	+		PFLU_RS10565	0.44	+1.2
2,328,089	+		PFLU_RS10565	0.44	-0.4
2,328,090	-		PFLU_RS10565	0.44	-1.8
2,328,090	-		PFLU_RS10565	0.44	+0.2
2,328,092	+		PFLU_RS10565	0.44	+0.4
2,328,092	+		PFLU_RS10565	0.44	+0.0
2,328,092	+		PFLU_RS10565	0.44	-3.0
2,328,092	+		PFLU_RS10565	0.44	+0.3
2,328,092	+		PFLU_RS10565	0.44	-2.1
2,328,092	+		PFLU_RS10565	0.44	+0.9
2,328,092	+		PFLU_RS10565	0.44	-0.2
2,328,092	+		PFLU_RS10565	0.44	-0.9
2,328,092	+		PFLU_RS10565	0.44	+1.6
2,328,092	+		PFLU_RS10565	0.44	-0.1
2,328,092	+		PFLU_RS10565	0.44	+0.2
2,328,092	+		PFLU_RS10565	0.44	-0.5
2,328,092	+		PFLU_RS10565	0.44	+0.0
2,328,092	+		PFLU_RS10565	0.44	-0.1
2,328,092	+		PFLU_RS10565	0.44	+0.5
2,328,092	+		PFLU_RS10565	0.44	-0.2
2,328,093	-		PFLU_RS10565	0.44	+0.3
2,328,093	-		PFLU_RS10565	0.44	+0.5
2,328,093	-		PFLU_RS10565	0.44	-0.3
2,328,093	-		PFLU_RS10565	0.44	-0.9
2,328,093	-		PFLU_RS10565	0.44	+0.5
2,328,093	-		PFLU_RS10565	0.44	-0.5
2,328,093	-		PFLU_RS10565	0.44	-1.3
2,328,093	-		PFLU_RS10565	0.44	+0.2
2,328,093	-		PFLU_RS10565	0.44	+0.0
2,328,093	-		PFLU_RS10565	0.44	-0.5
2,328,093	-		PFLU_RS10565	0.44	-0.0
2,328,093	-		PFLU_RS10565	0.44	-1.7
2,328,093	-		PFLU_RS10565	0.44	+0.6
2,328,093	-		PFLU_RS10565	0.44	-2.0
2,328,183	+		PFLU_RS10565	0.52	+0.0
2,328,183	+		PFLU_RS10565	0.52	-1.2
2,328,184	-		PFLU_RS10565	0.52	+0.6
2,328,200	+		PFLU_RS10565	0.54	+0.5
2,328,201	-		PFLU_RS10565	0.54	+0.4
2,328,201	-		PFLU_RS10565	0.54	-0.5
2,328,237	+		PFLU_RS10565	0.57	+1.6
2,328,237	+		PFLU_RS10565	0.57	+0.1
2,328,237	+		PFLU_RS10565	0.57	-1.0
2,328,237	+		PFLU_RS10565	0.57	-0.6
2,328,237	+		PFLU_RS10565	0.57	+0.3
2,328,238	-		PFLU_RS10565	0.57	+1.0
2,328,238	-		PFLU_RS10565	0.57	+0.4
2,328,276	+		PFLU_RS10565	0.61	+0.6
2,328,276	+		PFLU_RS10565	0.61	-0.3
2,328,276	+		PFLU_RS10565	0.61	+0.3
2,328,276	+		PFLU_RS10565	0.61	+0.4
2,328,276	+		PFLU_RS10565	0.61	+0.3
2,328,276	+		PFLU_RS10565	0.61	+0.4
2,328,276	+		PFLU_RS10565	0.61	+1.8
2,328,276	+		PFLU_RS10565	0.61	-1.0
2,328,276	+		PFLU_RS10565	0.61	-0.1
2,328,276	+		PFLU_RS10565	0.61	-0.3
2,328,276	+		PFLU_RS10565	0.61	-0.2
2,328,277	-		PFLU_RS10565	0.61	-1.3
2,328,277	-		PFLU_RS10565	0.61	-1.5
2,328,277	-		PFLU_RS10565	0.61	+0.6
2,328,277	-		PFLU_RS10565	0.61	-0.3
2,328,277	-		PFLU_RS10565	0.61	-1.6
2,328,277	-		PFLU_RS10565	0.61	+1.1
2,328,277	-		PFLU_RS10565	0.61	-0.7
2,328,277	-		PFLU_RS10565	0.61	+2.0
2,328,277	-		PFLU_RS10565	0.61	-0.2
2,328,277	-		PFLU_RS10565	0.61	+0.1
2,328,277	-		PFLU_RS10565	0.61	+0.1
2,328,277	-		PFLU_RS10565	0.61	+1.5
2,328,321	+		PFLU_RS10565	0.65	-1.0
2,328,406	-		PFLU_RS10565	0.73	+0.4
2,328,406	-		PFLU_RS10565	0.73	+0.8