Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_006328

Experiment: RCH2_defined_glucose_5mM with Pyridoxal 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Pyridoxal 1 mM
2,692,292	-		ABIE53_006327	0.54	-0.5
2,692,350	+		ABIE53_006327	0.57	-1.3
2,692,350	+		ABIE53_006327	0.57	+0.5
2,692,351	-		ABIE53_006327	0.57	-0.1
2,692,351	-		ABIE53_006327	0.57	+0.8
2,692,352	+		ABIE53_006327	0.57	+0.7
2,692,353	-		ABIE53_006327	0.57	+0.3
2,692,355	-		ABIE53_006327	0.57	+0.5
2,692,436	-		ABIE53_006327	0.61	+1.5
2,692,540	+		ABIE53_006327	0.66	-0.7
2,692,540	+		ABIE53_006327	0.66	+0.9
2,692,540	+		ABIE53_006327	0.66	-0.3
2,692,540	+		ABIE53_006327	0.66	-0.6
2,692,540	+		ABIE53_006327	0.66	+0.5
2,692,540	+		ABIE53_006327	0.66	-0.1
2,692,540	+		ABIE53_006327	0.66	+1.7
2,692,540	+		ABIE53_006327	0.66	+0.9
2,692,541	-		ABIE53_006327	0.67	-1.5
2,692,541	-		ABIE53_006327	0.67	-0.5
2,692,541	-		ABIE53_006327	0.67	-0.2
2,692,541	-		ABIE53_006327	0.67	+0.5
2,692,541	-		ABIE53_006327	0.67	+1.0
2,692,541	-		ABIE53_006327	0.67	-0.2
2,692,660	+		ABIE53_006327	0.73	+0.1
2,692,725	+		ABIE53_006327	0.76	+0.9
2,692,966	+		ABIE53_006327	0.89	-0.7
2,693,022	+				+1.4
2,693,023	-				+3.5
2,693,026	+				+0.3
2,693,026	+				-1.6
2,693,026	+				-0.4
2,693,027	-				-0.5
2,693,182	+				-0.0
2,693,182	+				-0.5
2,693,208	+				+0.5
2,693,208	+				-2.2
2,693,209	-				-1.1
2,693,235	+				-0.9
2,693,235	+				+1.5
2,693,523	-		ABIE53_006328	0.28	-1.2
2,693,693	+		ABIE53_006328	0.47	-1.1
2,693,694	-		ABIE53_006328	0.47	-0.9
2,693,815	+		ABIE53_006328	0.60	+1.1
2,693,816	-		ABIE53_006328	0.60	-1.2
2,693,816	-		ABIE53_006328	0.60	-0.1
2,693,844	+		ABIE53_006328	0.63	+0.3
2,693,844	+		ABIE53_006328	0.63	+0.1
2,693,845	-		ABIE53_006328	0.63	-0.5
2,693,845	-		ABIE53_006328	0.63	-0.1
2,693,935	+		ABIE53_006328	0.73	-0.0
2,693,935	+		ABIE53_006328	0.73	+0.1
2,693,936	-		ABIE53_006328	0.73	-0.5
2,694,113	-				+0.2
2,694,133	-				+1.1
2,694,250	+				+0.9
2,694,250	+				-0.1
2,694,250	+				+1.2
2,694,251	-				+0.1
2,694,366	+		ABIE53_006329	0.18	-0.1
2,694,367	-		ABIE53_006329	0.18	+0.2
2,694,406	+		ABIE53_006329	0.23	-0.3
2,694,583	+		ABIE53_006329	0.43	-1.3
2,694,659	-		ABIE53_006329	0.52	-0.2
2,694,659	-		ABIE53_006329	0.52	-0.3
2,694,685	+		ABIE53_006329	0.55	-0.3
2,694,709	+		ABIE53_006329	0.58	-0.4
2,694,709	+		ABIE53_006329	0.58	-1.2
2,694,709	+		ABIE53_006329	0.58	-0.9
2,694,709	+		ABIE53_006329	0.58	-0.1
2,694,710	-		ABIE53_006329	0.58	-1.1
2,694,883	+		ABIE53_006329	0.78	-0.5
2,694,884	-		ABIE53_006329	0.79	-1.8
2,694,884	-		ABIE53_006329	0.79	-1.5
2,695,074	+				+1.3