Experiment: MoYLS4 with Aluminum Chloride 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0065 and DVU0066 are separated by 214 nucleotides DVU0066 and DVU0067 are separated by 170 nucleotides DVU0067 and DVU0068 are separated by 376 nucleotides
DVU0065: DVU0065 - hypothetical protein (TIGR), at 77,110 to 77,907
DVU0065
DVU0066: DVU0066 - cytidine/deoxycytidylate deaminase domain protein (TIGR), at 78,122 to 78,691
DVU0066
DVU0067: DVU0067 - hypothetical protein (TIGR), at 78,862 to 79,170
DVU0067
DVU0068: DVU0068 - conserved hypothetical protein (TIGR), at 79,547 to 81,082
DVU0068
Position (kb)
78
79
80 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 77.918 kb on - strand at 77.936 kb on - strand at 77.961 kb on + strand at 77.969 kb on - strand at 77.976 kb on + strand at 77.984 kb on - strand at 78.000 kb on + strand at 78.033 kb on - strand at 78.116 kb on - strand at 78.116 kb on - strand at 78.223 kb on - strand, within DVU0066 at 78.266 kb on + strand, within DVU0066 at 78.370 kb on + strand, within DVU0066 at 78.407 kb on + strand, within DVU0066 at 78.415 kb on - strand, within DVU0066 at 78.442 kb on - strand, within DVU0066 at 78.442 kb on - strand, within DVU0066 at 78.442 kb on - strand, within DVU0066 at 78.470 kb on + strand, within DVU0066 at 78.470 kb on + strand, within DVU0066 at 78.470 kb on + strand, within DVU0066 at 78.509 kb on + strand, within DVU0066 at 78.509 kb on + strand, within DVU0066 at 78.533 kb on + strand, within DVU0066 at 78.573 kb on - strand, within DVU0066 at 78.575 kb on + strand, within DVU0066 at 78.646 kb on + strand at 78.651 kb on + strand at 78.654 kb on - strand at 78.886 kb on + strand at 78.894 kb on - strand, within DVU0067 at 78.894 kb on - strand, within DVU0067 at 78.964 kb on + strand, within DVU0067 at 78.980 kb on - strand, within DVU0067 at 78.987 kb on - strand, within DVU0067 at 79.009 kb on - strand, within DVU0067 at 79.100 kb on - strand, within DVU0067 at 79.117 kb on - strand, within DVU0067 at 79.134 kb on - strand, within DVU0067 at 79.211 kb on + strand at 79.288 kb on + strand at 79.353 kb on + strand at 79.360 kb on - strand at 79.394 kb on - strand at 79.533 kb on - strand at 79.591 kb on - strand at 79.606 kb on - strand at 79.615 kb on + strand at 79.615 kb on + strand at 79.615 kb on + strand at 79.615 kb on + strand at 79.623 kb on - strand at 79.623 kb on - strand at 79.677 kb on + strand at 79.685 kb on - strand at 79.707 kb on + strand, within DVU0068 at 79.715 kb on + strand, within DVU0068 at 79.715 kb on + strand, within DVU0068 at 79.725 kb on - strand, within DVU0068 at 79.761 kb on - strand, within DVU0068 at 79.787 kb on + strand, within DVU0068 at 79.787 kb on + strand, within DVU0068 at 79.787 kb on + strand, within DVU0068 at 79.822 kb on - strand, within DVU0068 at 79.856 kb on - strand, within DVU0068 at 79.866 kb on - strand, within DVU0068 at 79.906 kb on - strand, within DVU0068 at 79.941 kb on - strand, within DVU0068 at 79.958 kb on + strand, within DVU0068 at 79.966 kb on - strand, within DVU0068 at 80.026 kb on + strand, within DVU0068 at 80.026 kb on + strand, within DVU0068 at 80.026 kb on + strand, within DVU0068 at 80.034 kb on - strand, within DVU0068 at 80.034 kb on - strand, within DVU0068 at 80.078 kb on + strand, within DVU0068 at 80.100 kb on - strand, within DVU0068 at 80.103 kb on + strand, within DVU0068 at 80.129 kb on + strand, within DVU0068
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum Chloride 10mM remove 77,918 - -0.3 77,936 - -1.2 77,961 + -0.3 77,969 - -0.1 77,976 + +0.5 77,984 - -0.7 78,000 + +0.5 78,033 - -0.5 78,116 - +0.2 78,116 - -2.1 78,223 - DVU0066 0.18 -0.5 78,266 + DVU0066 0.25 -0.1 78,370 + DVU0066 0.44 -0.5 78,407 + DVU0066 0.50 -0.0 78,415 - DVU0066 0.51 +1.6 78,442 - DVU0066 0.56 +0.1 78,442 - DVU0066 0.56 -0.2 78,442 - DVU0066 0.56 -0.3 78,470 + DVU0066 0.61 +1.1 78,470 + DVU0066 0.61 -1.1 78,470 + DVU0066 0.61 -0.4 78,509 + DVU0066 0.68 -0.7 78,509 + DVU0066 0.68 -0.0 78,533 + DVU0066 0.72 -2.5 78,573 - DVU0066 0.79 -1.1 78,575 + DVU0066 0.79 -0.4 78,646 + +0.1 78,651 + -0.3 78,654 - +0.2 78,886 + +0.1 78,894 - DVU0067 0.10 -0.5 78,894 - DVU0067 0.10 -0.2 78,964 + DVU0067 0.33 -1.7 78,980 - DVU0067 0.38 -0.1 78,987 - DVU0067 0.40 +1.1 79,009 - DVU0067 0.48 -0.5 79,100 - DVU0067 0.77 -1.2 79,117 - DVU0067 0.83 -1.1 79,134 - DVU0067 0.88 +0.5 79,211 + +0.6 79,288 + +0.1 79,353 + -1.3 79,360 - -0.9 79,394 - +0.3 79,533 - +1.1 79,591 - +2.1 79,606 - -0.0 79,615 + -0.3 79,615 + -0.9 79,615 + -0.1 79,615 + +0.1 79,623 - -0.5 79,623 - +0.1 79,677 + +1.8 79,685 - -1.1 79,707 + DVU0068 0.10 -0.3 79,715 + DVU0068 0.11 +0.0 79,715 + DVU0068 0.11 -0.0 79,725 - DVU0068 0.12 -0.1 79,761 - DVU0068 0.14 -0.9 79,787 + DVU0068 0.16 -0.9 79,787 + DVU0068 0.16 -0.2 79,787 + DVU0068 0.16 -0.9 79,822 - DVU0068 0.18 +0.3 79,856 - DVU0068 0.20 -0.7 79,866 - DVU0068 0.21 -0.4 79,906 - DVU0068 0.23 -0.6 79,941 - DVU0068 0.26 -0.4 79,958 + DVU0068 0.27 +0.3 79,966 - DVU0068 0.27 -0.5 80,026 + DVU0068 0.31 -0.3 80,026 + DVU0068 0.31 -0.3 80,026 + DVU0068 0.31 -0.1 80,034 - DVU0068 0.32 +0.1 80,034 - DVU0068 0.32 -0.4 80,078 + DVU0068 0.35 -2.8 80,100 - DVU0068 0.36 -0.3 80,103 + DVU0068 0.36 -0.0 80,129 + DVU0068 0.38 +0.5
Or see this region's nucleotide sequence