Experiment: MoYLS4 with Aluminum Chloride 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2472 and DVU2473 are separated by 145 nucleotides DVU2473 and DVU2474 are separated by 7 nucleotides DVU2474 and DVU2475 are separated by 260 nucleotides
DVU2472: DVU2472 - conserved hypothetical protein (TIGR), at 2,580,029 to 2,582,368
DVU2472
DVU2473: DVU2473 - hypothetical protein (TIGR), at 2,582,514 to 2,582,657
DVU2473
DVU2474: DVU2474 - hypothetical protein (TIGR), at 2,582,665 to 2,583,147
DVU2474
DVU2475: DVU2475 - oxidoreductase, NAD-binding, putative (TIGR), at 2,583,408 to 2,584,250
DVU2475
Position (kb)
2582
2583
2584 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2581.686 kb on - strand, within DVU2472 at 2581.714 kb on - strand, within DVU2472 at 2581.783 kb on + strand, within DVU2472 at 2581.784 kb on - strand, within DVU2472 at 2581.902 kb on + strand, within DVU2472 at 2581.935 kb on - strand, within DVU2472 at 2581.935 kb on - strand, within DVU2472 at 2581.955 kb on + strand, within DVU2472 at 2581.982 kb on + strand, within DVU2472 at 2581.993 kb on + strand, within DVU2472 at 2582.061 kb on + strand, within DVU2472 at 2582.084 kb on + strand, within DVU2472 at 2582.117 kb on + strand, within DVU2472 at 2582.170 kb on - strand at 2582.190 kb on + strand at 2582.284 kb on - strand at 2582.293 kb on + strand at 2582.301 kb on - strand at 2582.330 kb on - strand at 2582.427 kb on - strand at 2582.480 kb on + strand at 2582.488 kb on - strand at 2582.493 kb on - strand at 2582.545 kb on + strand, within DVU2473 at 2582.624 kb on - strand, within DVU2473 at 2582.702 kb on - strand at 2582.847 kb on - strand, within DVU2474 at 2582.902 kb on - strand, within DVU2474 at 2583.080 kb on - strand, within DVU2474 at 2583.149 kb on + strand at 2583.159 kb on - strand at 2583.193 kb on - strand at 2583.252 kb on - strand at 2583.358 kb on - strand at 2583.437 kb on + strand at 2583.509 kb on - strand, within DVU2475 at 2583.549 kb on + strand, within DVU2475 at 2583.557 kb on - strand, within DVU2475 at 2583.666 kb on - strand, within DVU2475 at 2583.676 kb on - strand, within DVU2475 at 2583.704 kb on + strand, within DVU2475 at 2583.711 kb on + strand, within DVU2475 at 2583.711 kb on + strand, within DVU2475 at 2583.711 kb on + strand, within DVU2475 at 2583.730 kb on + strand, within DVU2475 at 2583.752 kb on + strand, within DVU2475 at 2583.825 kb on - strand, within DVU2475 at 2583.859 kb on + strand, within DVU2475 at 2583.996 kb on + strand, within DVU2475 at 2584.004 kb on - strand, within DVU2475 at 2584.009 kb on + strand, within DVU2475 at 2584.017 kb on - strand, within DVU2475 at 2584.039 kb on - strand, within DVU2475 at 2584.041 kb on + strand, within DVU2475 at 2584.074 kb on - strand, within DVU2475
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum Chloride 10mM remove 2,581,686 - DVU2472 0.71 +2.0 2,581,714 - DVU2472 0.72 -0.7 2,581,783 + DVU2472 0.75 +0.8 2,581,784 - DVU2472 0.75 -0.8 2,581,902 + DVU2472 0.80 +0.8 2,581,935 - DVU2472 0.81 -0.3 2,581,935 - DVU2472 0.81 -0.5 2,581,955 + DVU2472 0.82 -1.0 2,581,982 + DVU2472 0.83 -1.5 2,581,993 + DVU2472 0.84 +0.1 2,582,061 + DVU2472 0.87 -2.1 2,582,084 + DVU2472 0.88 +0.9 2,582,117 + DVU2472 0.89 +0.2 2,582,170 - -0.2 2,582,190 + -0.6 2,582,284 - +1.2 2,582,293 + +0.7 2,582,301 - -0.4 2,582,330 - +0.4 2,582,427 - -0.2 2,582,480 + -0.5 2,582,488 - -0.4 2,582,493 - -0.4 2,582,545 + DVU2473 0.22 -0.8 2,582,624 - DVU2473 0.76 +0.3 2,582,702 - -0.3 2,582,847 - DVU2474 0.38 -0.1 2,582,902 - DVU2474 0.49 -1.2 2,583,080 - DVU2474 0.86 -1.7 2,583,149 + +0.8 2,583,159 - -0.5 2,583,193 - -1.2 2,583,252 - -1.1 2,583,358 - -0.3 2,583,437 + +0.1 2,583,509 - DVU2475 0.12 -0.6 2,583,549 + DVU2475 0.17 -0.4 2,583,557 - DVU2475 0.18 +0.2 2,583,666 - DVU2475 0.31 -0.0 2,583,676 - DVU2475 0.32 -0.1 2,583,704 + DVU2475 0.35 -0.8 2,583,711 + DVU2475 0.36 -0.1 2,583,711 + DVU2475 0.36 +0.0 2,583,711 + DVU2475 0.36 -0.1 2,583,730 + DVU2475 0.38 -0.7 2,583,752 + DVU2475 0.41 -0.4 2,583,825 - DVU2475 0.49 -0.3 2,583,859 + DVU2475 0.53 +1.0 2,583,996 + DVU2475 0.70 -0.8 2,584,004 - DVU2475 0.71 +0.3 2,584,009 + DVU2475 0.71 -0.1 2,584,017 - DVU2475 0.72 -0.1 2,584,039 - DVU2475 0.75 -0.4 2,584,041 + DVU2475 0.75 -0.2 2,584,074 - DVU2475 0.79 -0.2
Or see this region's nucleotide sequence