Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005377

Experiment: RCH2_defined_glucose_5mM with Nerolidol 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Nerolidol 5 mM
1,646,796	+		ABIE53_005376	0.11	-0.3
1,646,797	-		ABIE53_005376	0.11	+0.2
1,646,799	-		ABIE53_005376	0.11	-0.1
1,646,799	-		ABIE53_005376	0.11	-0.5
1,646,799	-		ABIE53_005376	0.11	+1.0
1,646,799	-		ABIE53_005376	0.11	-0.0
1,646,799	-		ABIE53_005376	0.11	-1.1
1,646,799	-		ABIE53_005376	0.11	+0.7
1,646,799	-		ABIE53_005376	0.11	-0.5
1,646,803	-		ABIE53_005376	0.12	-1.0
1,646,837	+		ABIE53_005376	0.15	-0.9
1,646,837	+		ABIE53_005376	0.15	-1.1
1,646,838	-		ABIE53_005376	0.15	-1.1
1,646,838	-		ABIE53_005376	0.15	-0.2
1,646,838	-		ABIE53_005376	0.15	-0.4
1,646,838	-		ABIE53_005376	0.15	-3.4
1,647,158	-		ABIE53_005376	0.48	-1.2
1,647,158	-		ABIE53_005376	0.48	+1.0
1,647,472	+		ABIE53_005376	0.81	+0.8
1,647,533	+		ABIE53_005376	0.87	+0.7
1,647,533	+		ABIE53_005376	0.87	+2.0
1,647,539	+		ABIE53_005376	0.88	+0.5
1,647,602	-				+2.0
1,647,682	+				+1.5
1,647,691	+				+1.3
1,647,694	-				+0.6
1,647,979	+		ABIE53_005377	0.30	-0.9
1,647,979	+		ABIE53_005377	0.30	-0.9
1,648,017	+		ABIE53_005377	0.35	+1.5
1,648,219	+		ABIE53_005377	0.61	-1.7
1,648,306	+		ABIE53_005377	0.73	-1.4
1,648,457	+				-1.0
1,648,515	+				-1.7
1,648,515	+				-0.1
1,648,522	-				-0.7
1,648,617	+		ABIE53_005378	0.12	+0.0
1,648,617	+		ABIE53_005378	0.12	-2.4
1,648,618	-		ABIE53_005378	0.12	+0.5
1,648,621	+		ABIE53_005378	0.13	-0.1
1,648,622	-		ABIE53_005378	0.13	-0.9
1,648,664	-		ABIE53_005378	0.18	-0.3
1,648,707	+		ABIE53_005378	0.24	-1.5
1,648,707	+		ABIE53_005378	0.24	-0.1
1,648,708	-		ABIE53_005378	0.24	-0.8
1,648,845	+		ABIE53_005378	0.41	-0.5
1,648,845	+		ABIE53_005378	0.41	-2.5
1,648,948	+		ABIE53_005378	0.54	+1.9
1,648,949	-		ABIE53_005378	0.54	+0.1
1,648,949	-		ABIE53_005378	0.54	+0.1
1,649,007	+		ABIE53_005378	0.62	+0.6
1,649,103	+		ABIE53_005378	0.74	-0.1
1,649,104	-		ABIE53_005378	0.74	-0.2
1,649,110	-		ABIE53_005378	0.75	+0.5
1,649,216	+		ABIE53_005378	0.88	-0.3
1,649,258	+				+0.5
1,649,259	-				+1.5
1,649,299	+				-0.9
1,649,299	+				-0.7
1,649,394	+				+0.3
1,649,435	+		ABIE53_005379	0.15	+0.5
1,649,494	+		ABIE53_005379	0.23	-0.1
1,649,495	-		ABIE53_005379	0.23	+0.5
1,649,495	-		ABIE53_005379	0.23	-0.5