Experiment: Fungal_growth_media_mCAFEs_v1 with Iron (II) 0.209 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04475 and BWI76_RS04480 are separated by 103 nucleotides BWI76_RS04480 and BWI76_RS04485 are separated by 261 nucleotides
BWI76_RS04475: BWI76_RS04475 - ROK family protein, at 927,076 to 927,960
_RS04475
BWI76_RS04480: BWI76_RS04480 - YgdI/YgdR family lipoprotein, at 928,064 to 928,297
_RS04480
BWI76_RS04485: BWI76_RS04485 - hypothetical protein, at 928,559 to 930,115
_RS04485
Position (kb) 928
929 Strain fitness (log2 ratio) -2
-1
0
1 at 927.074 kb on - strand at 927.433 kb on + strand, within BWI76_RS04475 at 927.433 kb on + strand, within BWI76_RS04475 at 927.441 kb on - strand, within BWI76_RS04475 at 927.613 kb on - strand, within BWI76_RS04475 at 927.747 kb on + strand, within BWI76_RS04475 at 927.752 kb on + strand, within BWI76_RS04475 at 927.815 kb on + strand, within BWI76_RS04475 at 927.823 kb on - strand, within BWI76_RS04475 at 927.907 kb on + strand at 927.910 kb on - strand at 927.915 kb on - strand at 927.922 kb on + strand at 927.930 kb on - strand at 928.017 kb on - strand at 928.077 kb on - strand at 928.109 kb on + strand, within BWI76_RS04480 at 928.167 kb on - strand, within BWI76_RS04480 at 928.208 kb on + strand, within BWI76_RS04480 at 928.208 kb on + strand, within BWI76_RS04480 at 928.234 kb on + strand, within BWI76_RS04480 at 928.242 kb on + strand, within BWI76_RS04480 at 928.250 kb on - strand, within BWI76_RS04480 at 928.250 kb on - strand, within BWI76_RS04480 at 928.252 kb on + strand, within BWI76_RS04480 at 928.252 kb on + strand, within BWI76_RS04480 at 928.260 kb on - strand, within BWI76_RS04480 at 928.260 kb on - strand, within BWI76_RS04480 at 928.267 kb on + strand, within BWI76_RS04480 at 928.267 kb on + strand, within BWI76_RS04480 at 928.267 kb on + strand, within BWI76_RS04480 at 928.267 kb on + strand, within BWI76_RS04480 at 928.275 kb on - strand at 928.275 kb on - strand at 928.288 kb on + strand at 928.296 kb on - strand at 928.296 kb on - strand at 928.296 kb on - strand at 928.312 kb on + strand at 928.312 kb on - strand at 928.313 kb on - strand at 928.320 kb on + strand at 928.320 kb on + strand at 928.320 kb on + strand at 928.320 kb on + strand at 928.320 kb on + strand at 928.322 kb on - strand at 928.322 kb on - strand at 928.328 kb on - strand at 928.328 kb on - strand at 928.328 kb on - strand at 928.328 kb on - strand at 928.328 kb on - strand at 928.328 kb on - strand at 928.328 kb on - strand at 928.328 kb on - strand at 928.328 kb on - strand at 928.346 kb on + strand at 928.346 kb on + strand at 928.346 kb on + strand at 928.354 kb on - strand at 928.354 kb on - strand at 928.354 kb on - strand at 928.354 kb on - strand at 928.388 kb on - strand at 928.390 kb on - strand at 928.392 kb on + strand at 928.392 kb on + strand at 928.395 kb on - strand at 928.397 kb on + strand at 928.399 kb on + strand at 928.400 kb on - strand at 928.400 kb on - strand at 928.400 kb on - strand at 928.400 kb on - strand at 928.400 kb on - strand at 928.400 kb on - strand at 928.403 kb on + strand at 928.403 kb on + strand at 928.407 kb on - strand at 928.411 kb on - strand at 928.411 kb on - strand at 928.411 kb on - strand at 928.412 kb on - strand at 928.438 kb on - strand at 928.476 kb on + strand at 928.476 kb on + strand at 928.476 kb on + strand at 928.476 kb on + strand at 928.476 kb on + strand at 928.476 kb on + strand at 928.476 kb on + strand at 928.484 kb on - strand at 928.484 kb on - strand at 928.484 kb on - strand at 928.484 kb on - strand at 928.484 kb on - strand at 928.484 kb on - strand at 928.484 kb on - strand at 928.484 kb on - strand at 928.484 kb on - strand at 928.504 kb on - strand at 928.561 kb on - strand at 928.892 kb on - strand, within BWI76_RS04485 at 928.892 kb on - strand, within BWI76_RS04485 at 928.892 kb on - strand, within BWI76_RS04485 at 928.973 kb on + strand, within BWI76_RS04485 at 929.256 kb on + strand, within BWI76_RS04485 at 929.261 kb on + strand, within BWI76_RS04485 at 929.261 kb on + strand, within BWI76_RS04485 at 929.261 kb on + strand, within BWI76_RS04485 at 929.261 kb on + strand, within BWI76_RS04485 at 929.266 kb on + strand, within BWI76_RS04485 at 929.268 kb on - strand, within BWI76_RS04485 at 929.269 kb on - strand, within BWI76_RS04485 at 929.269 kb on - strand, within BWI76_RS04485 at 929.274 kb on - strand, within BWI76_RS04485 at 929.284 kb on + strand, within BWI76_RS04485 at 929.284 kb on + strand, within BWI76_RS04485 at 929.284 kb on + strand, within BWI76_RS04485 at 929.284 kb on + strand, within BWI76_RS04485 at 929.284 kb on + strand at 929.287 kb on + strand, within BWI76_RS04485
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1 with Iron (II) 0.209 mg/mL remove 927,074 - -0.1 927,433 + BWI76_RS04475 0.40 -0.6 927,433 + BWI76_RS04475 0.40 -0.2 927,441 - BWI76_RS04475 0.41 +0.1 927,613 - BWI76_RS04475 0.61 +0.3 927,747 + BWI76_RS04475 0.76 +0.3 927,752 + BWI76_RS04475 0.76 +0.2 927,815 + BWI76_RS04475 0.84 -0.1 927,823 - BWI76_RS04475 0.84 +0.2 927,907 + +0.0 927,910 - +0.1 927,915 - -0.1 927,922 + +0.0 927,930 - -0.0 928,017 - -0.6 928,077 - +0.0 928,109 + BWI76_RS04480 0.19 +0.4 928,167 - BWI76_RS04480 0.44 +0.8 928,208 + BWI76_RS04480 0.62 +0.2 928,208 + BWI76_RS04480 0.62 +0.2 928,234 + BWI76_RS04480 0.73 +0.1 928,242 + BWI76_RS04480 0.76 +0.4 928,250 - BWI76_RS04480 0.79 -0.1 928,250 - BWI76_RS04480 0.79 -0.1 928,252 + BWI76_RS04480 0.80 +0.0 928,252 + BWI76_RS04480 0.80 +0.2 928,260 - BWI76_RS04480 0.84 -0.4 928,260 - BWI76_RS04480 0.84 -0.1 928,267 + BWI76_RS04480 0.87 -0.0 928,267 + BWI76_RS04480 0.87 +0.4 928,267 + BWI76_RS04480 0.87 -0.3 928,267 + BWI76_RS04480 0.87 -0.5 928,275 - +0.3 928,275 - -0.1 928,288 + -0.7 928,296 - +0.9 928,296 - +1.0 928,296 - +0.6 928,312 + -0.3 928,312 - +0.4 928,313 - -0.6 928,320 + +0.6 928,320 + +0.1 928,320 + -0.0 928,320 + +0.3 928,320 + +1.3 928,322 - -0.2 928,322 - +0.3 928,328 - -0.2 928,328 - -1.2 928,328 - +0.2 928,328 - +0.8 928,328 - +0.1 928,328 - -0.8 928,328 - +0.1 928,328 - +0.2 928,328 - +0.2 928,346 + -1.0 928,346 + -1.6 928,346 + -0.8 928,354 - +0.4 928,354 - -0.4 928,354 - -2.0 928,354 - -1.8 928,388 - -0.6 928,390 - -0.2 928,392 + -0.1 928,392 + -0.5 928,395 - -2.4 928,397 + -2.3 928,399 + -0.5 928,400 - +0.3 928,400 - -0.1 928,400 - +0.6 928,400 - -0.5 928,400 - -0.5 928,400 - +0.2 928,403 + +0.7 928,403 + -0.1 928,407 - +0.1 928,411 - -0.1 928,411 - +0.7 928,411 - +0.5 928,412 - -0.3 928,438 - -0.2 928,476 + +1.4 928,476 + +0.1 928,476 + +0.4 928,476 + -1.2 928,476 + -1.6 928,476 + -2.1 928,476 + +0.3 928,484 - -1.1 928,484 - +0.4 928,484 - +0.3 928,484 - +0.0 928,484 - -0.0 928,484 - +0.1 928,484 - -0.2 928,484 - -0.0 928,484 - -0.4 928,504 - +1.6 928,561 - +0.9 928,892 - BWI76_RS04485 0.21 +1.0 928,892 - BWI76_RS04485 0.21 +0.1 928,892 - BWI76_RS04485 0.21 -0.1 928,973 + BWI76_RS04485 0.27 -1.6 929,256 + BWI76_RS04485 0.45 -1.2 929,261 + BWI76_RS04485 0.45 +0.1 929,261 + BWI76_RS04485 0.45 +0.2 929,261 + BWI76_RS04485 0.45 -0.7 929,261 + BWI76_RS04485 0.45 +0.1 929,266 + BWI76_RS04485 0.45 +1.4 929,268 - BWI76_RS04485 0.46 -1.2 929,269 - BWI76_RS04485 0.46 +0.1 929,269 - BWI76_RS04485 0.46 +0.7 929,274 - BWI76_RS04485 0.46 +0.1 929,284 + BWI76_RS04485 0.47 +0.5 929,284 + BWI76_RS04485 0.47 +0.8 929,284 + BWI76_RS04485 0.47 +0.1 929,284 + BWI76_RS04485 0.47 -0.1 929,284 + +0.4 929,287 + BWI76_RS04485 0.47 +0.3
Or see this region's nucleotide sequence