Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4049

Experiment: KB with D-Salicin 240 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with D-Salicin 240 ug/ml
4,831,624	+				+0.0
4,831,625	-				-0.0
4,831,625	-				+0.2
4,831,648	+				+0.7
4,831,649	-				-2.2
4,831,997	+		Psyr_4048	0.23	+1.6
4,831,998	-		Psyr_4048	0.23	-0.4
4,831,998	-		Psyr_4048	0.23	-0.9
4,832,106	-		Psyr_4048	0.37	+0.6
4,832,106	-		Psyr_4048	0.37	+1.4
4,832,264	+		Psyr_4048	0.58	-0.4
4,832,264	+		Psyr_4048	0.58	+0.2
4,832,264	+		Psyr_4048	0.58	+0.1
4,832,264	+		Psyr_4048	0.58	-0.1
4,832,265	-		Psyr_4048	0.58	+1.1
4,832,265	-		Psyr_4048	0.58	+0.4
4,832,265	-		Psyr_4048	0.58	+1.0
4,832,306	-		Psyr_4048	0.63	-0.9
4,832,345	+		Psyr_4048	0.69	+1.4
4,832,447	+		Psyr_4048	0.82	+0.3
4,832,447	+		Psyr_4048	0.82	+0.0
4,832,447	+		Psyr_4048	0.82	+0.2
4,832,447	+		Psyr_4048	0.82	-0.7
4,832,447	+		Psyr_4048	0.82	+0.6
4,832,447	+		Psyr_4048	0.82	-0.4
4,832,448	-		Psyr_4048	0.82	+0.5
4,832,448	-		Psyr_4048	0.82	-0.3
4,832,448	-		Psyr_4048	0.82	-1.1
4,832,600	-				+1.4
4,832,621	+				+1.5
4,832,882	+		Psyr_4049	0.38	-0.4
4,832,882	+		Psyr_4049	0.38	+0.0
4,832,882	+		Psyr_4049	0.38	-1.2
4,832,882	+		Psyr_4049	0.38	-0.6
4,832,883	-		Psyr_4049	0.38	-0.1
4,833,228	+		Psyr_4049	0.81	-0.9
4,833,228	+		Psyr_4049	0.81	+1.5
4,833,228	+		Psyr_4049	0.81	-0.5
4,833,229	-		Psyr_4049	0.82	-1.3
4,833,398	-		Psyr_4050	0.11	+1.7
4,833,619	+		Psyr_4050	0.48	-0.2
4,833,620	-		Psyr_4050	0.48	+1.3
4,833,620	-		Psyr_4050	0.48	+0.1
4,833,718	+		Psyr_4050	0.64	-0.0
4,833,925	+				+0.1
4,833,925	+				-0.3
4,833,925	+				+0.7
4,833,925	+				-0.6
4,833,925	+				-0.4
4,833,925	+				+2.0
4,833,925	+				+3.3
4,833,926	-				+0.8
4,833,926	-				-0.6
4,833,926	-				-0.5
4,833,945	-				-0.7
4,833,945	-				-0.7
4,833,970	+				+0.7
4,833,973	-				+0.1
4,834,008	+				-0.1
4,834,008	+				-0.6
4,834,009	-				+0.7
4,834,016	+				+2.0
4,834,016	+				+0.1
4,834,016	+				+0.1
4,834,017	-				-0.6
4,834,017	-				+1.9
4,834,022	+				-0.3
4,834,022	+				+1.9
4,834,023	-				-2.8
4,834,049	-				-0.0
4,834,076	+				-0.8
4,834,119	+				+0.8
4,834,119	+				+0.4
4,834,119	+				+1.1
4,834,119	+				+0.6
4,834,119	+				+0.7
4,834,119	+				-0.6
4,834,119	+				-0.0
4,834,120	-				-2.0
4,834,120	-				+0.1
4,834,120	-				-1.0
4,834,120	-				+1.1
4,834,122	+				-0.1
4,834,122	+				-1.4
4,834,122	+				+1.1
4,834,122	+				-0.4
4,834,122	+				+0.6
4,834,122	+				+0.7
4,834,122	+				+0.3
4,834,122	+				-1.3
4,834,122	+				+0.5
4,834,123	-				-0.9
4,834,123	-				-0.7
4,834,123	-				-0.9
4,834,123	-				-0.5
4,834,123	-				-0.4
4,834,123	-				-0.9
4,834,202	+		Psyr_4051	0.33	-1.3
4,834,202	+		Psyr_4051	0.33	+0.4
4,834,203	-		Psyr_4051	0.34	-0.3
4,834,362	+		Psyr_4051	0.84	-0.8
4,834,362	+		Psyr_4051	0.84	+0.6