Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3836

Experiment: KB with D-Salicin 240 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with D-Salicin 240 ug/ml
4,570,887	+		Psyr_3834	0.62	-3.9
4,571,016	+		Psyr_3834	0.70	+0.5
4,571,016	+		Psyr_3834	0.70	+0.7
4,571,016	+		Psyr_3834	0.70	-0.9
4,571,016	+		Psyr_3834	0.70	+1.0
4,571,017	-		Psyr_3834	0.70	+0.1
4,571,017	-		Psyr_3834	0.70	+1.3
4,571,017	-		Psyr_3834	0.70	+0.5
4,571,203	-		Psyr_3834	0.81	-0.1
4,571,203	-		Psyr_3834	0.81	-0.1
4,571,203	-		Psyr_3834	0.81	+0.4
4,571,273	+		Psyr_3834	0.85	+0.4
4,571,273	+		Psyr_3834	0.85	+1.1
4,571,273	+		Psyr_3834	0.85	-0.9
4,571,273	+		Psyr_3834	0.85	-0.9
4,571,273	+		Psyr_3834	0.85	+0.5
4,571,274	-		Psyr_3834	0.85	-0.2
4,571,274	-		Psyr_3834	0.85	-0.1
4,571,274	-		Psyr_3834	0.85	-0.2
4,571,320	+		Psyr_3834	0.88	-0.3
4,571,320	+		Psyr_3834	0.88	+0.9
4,571,321	-		Psyr_3834	0.88	+1.1
4,571,321	-		Psyr_3834	0.88	+1.0
4,571,361	+				+0.3
4,571,361	+				-0.3
4,571,361	+				-1.0
4,571,362	-				+0.9
4,571,362	-				+0.7
4,571,373	+				+0.3
4,571,373	+				+0.1
4,571,373	+				-0.9
4,571,373	+				-0.1
4,571,374	-				-1.1
4,571,374	-				-0.3
4,571,374	-				+0.5
4,571,519	-				+0.5
4,571,519	-				+1.1
4,571,597	+				-1.5
4,571,597	+				-0.3
4,571,598	-				-0.1
4,571,598	-				-0.8
4,571,604	+				+0.3
4,571,622	+		Psyr_3835	0.16	-0.2
4,571,623	-		Psyr_3835	0.17	-0.4
4,571,650	+		Psyr_3835	0.33	+0.3
4,571,744	-				-0.3
4,571,798	+				+0.1
4,571,858	+				-0.9
4,571,859	-				+0.2
4,572,089	+		Psyr_3836	0.12	-1.3
4,572,428	+		Psyr_3836	0.32	-0.3
4,572,760	+		Psyr_3836	0.52	-0.3
4,572,761	-		Psyr_3836	0.52	-0.1
4,572,770	-		Psyr_3836	0.53	-0.1
4,572,853	+		Psyr_3836	0.57	-0.9
4,572,931	+		Psyr_3836	0.62	-1.4
4,572,932	-		Psyr_3836	0.62	-0.5
4,573,073	+		Psyr_3836	0.70	-0.6
4,573,073	+		Psyr_3836	0.70	-0.6
4,573,074	-		Psyr_3836	0.71	-0.6
4,573,133	-		Psyr_3836	0.74	+0.8
4,573,247	-		Psyr_3836	0.81	-1.3
4,573,247	-		Psyr_3836	0.81	+0.3
4,573,296	+		Psyr_3836	0.84	-0.1
4,573,417	+				-2.5
4,573,505	-				+0.1
4,573,505	-				+2.7
4,573,572	+				-2.3
4,573,573	-				+1.1
4,573,595	+				-0.4
4,573,595	+				-2.2
4,573,595	+				-0.1
4,573,595	+				-0.7
4,573,595	+				-0.3
4,573,595	+				-1.8
4,573,596	-				+1.0
4,573,596	-				+0.2
4,573,596	-				+0.1
4,573,596	-				-0.5
4,573,596	-				+0.7
4,573,596	-				+0.8
4,573,596	-				+0.5
4,573,596	-				-0.1
4,573,619	+				-1.1
4,573,620	-				+0.2
4,573,620	-				-2.1
4,573,637	+		Psyr_3837	0.18	-0.6
4,573,637	+		Psyr_3837	0.18	-1.1
4,573,638	-		Psyr_3837	0.19	+0.8
4,573,705	-		Psyr_3837	0.65	+0.8
4,573,755	+				+0.7
4,573,755	+				-0.8
4,573,755	+				-0.4
4,573,755	+				+1.7
4,573,756	-				-0.3
4,573,756	-				-0.9
4,573,756	-				-1.3
4,573,761	+				+0.7
4,573,762	-				-0.5
4,573,762	-				+0.9
4,573,762	-				-2.3
4,573,762	-				-0.3
4,573,780	+				-0.8
4,573,780	+				-1.7
4,573,783	+				+0.2
4,573,783	+				-0.0
4,573,783	+				-0.7
4,573,784	-				-0.7
4,573,784	-				+0.8
4,573,784	-				+0.3