Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2962

Experiment: KB with D-Salicin 240 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with D-Salicin 240 ug/ml
3,550,017	+		Psyr_2961	0.54	-0.4
3,550,021	+		Psyr_2961	0.54	+0.4
3,550,021	+		Psyr_2961	0.54	+0.5
3,550,021	+		Psyr_2961	0.54	-0.4
3,550,021	+		Psyr_2961	0.54	+0.4
3,550,022	-		Psyr_2961	0.54	-0.6
3,550,022	-		Psyr_2961	0.54	-1.4
3,550,074	+		Psyr_2961	0.57	-0.6
3,550,074	+		Psyr_2961	0.57	+0.9
3,550,074	+		Psyr_2961	0.57	+1.8
3,550,074	+		Psyr_2961	0.57	+0.2
3,550,075	-		Psyr_2961	0.58	+1.2
3,550,075	-		Psyr_2961	0.58	-0.3
3,550,075	-		Psyr_2961	0.58	+1.9
3,550,075	-		Psyr_2961	0.58	-1.5
3,550,075	-		Psyr_2961	0.58	-0.1
3,550,125	-		Psyr_2961	0.61	+0.3
3,550,582	-		Psyr_2961	0.88	-1.5
3,550,582	-		Psyr_2961	0.88	-0.5
3,550,634	-				+1.0
3,550,708	-				+0.5
3,550,767	+				-1.0
3,550,768	-				-0.6
3,550,836	-				-0.8
3,550,836	-				+2.1
3,550,836	-				+1.0
3,550,836	-				+1.4
3,550,836	-				-0.4
3,550,836	-				+0.5
3,550,836	-				-1.0
3,550,836	-				+0.0
3,550,836	-				+0.8
3,550,836	-				+1.6
3,550,836	-				+0.6
3,550,836	-				-0.2
3,550,836	-				-0.6
3,550,836	-				-0.0
3,550,836	-				-0.7
3,550,838	-				+0.2
3,550,838	-				+0.3
3,550,838	-				+1.4
3,550,838	-				-0.3
3,550,838	-				-0.7
3,550,838	-				+1.6
3,550,838	-				-2.4
3,550,838	-				+3.2
3,550,838	-				-0.8
3,550,838	-				+0.4
3,550,838	-				+0.9
3,550,838	-				+0.0
3,550,838	-				-2.0
3,551,000	+				-0.6
3,551,001	-				+0.6
3,551,028	-				-0.8
3,551,028	-				+0.2
3,551,028	-				+0.5
3,551,170	+		Psyr_2962	0.18	-0.9
3,551,170	+		Psyr_2962	0.18	-1.2
3,551,171	-		Psyr_2962	0.18	-0.7
3,551,171	-		Psyr_2962	0.18	-0.0
3,551,171	-		Psyr_2962	0.18	-0.6
3,551,171	-		Psyr_2962	0.18	-0.5
3,551,171	-		Psyr_2962	0.18	-0.2
3,551,171	-		Psyr_2962	0.18	-0.2
3,551,213	+		Psyr_2962	0.22	-2.8
3,551,263	-		Psyr_2962	0.28	-1.0
3,551,603	-		Psyr_2962	0.67	-0.1
3,551,603	-		Psyr_2962	0.67	-1.4
3,551,603	-		Psyr_2962	0.67	-0.5
3,551,825	-				+0.4
3,551,830	+				+1.1
3,551,918	-				-0.0
3,552,127	+		Psyr_2963	0.27	-0.1
3,552,127	+		Psyr_2963	0.27	-1.2
3,552,127	+		Psyr_2963	0.27	-2.8
3,552,127	+		Psyr_2963	0.27	+0.5
3,552,128	-		Psyr_2963	0.27	-1.2
3,552,128	-		Psyr_2963	0.27	+0.1
3,552,128	-		Psyr_2963	0.27	-0.2
3,552,128	-		Psyr_2963	0.27	+0.4
3,552,128	-		Psyr_2963	0.27	+0.1
3,552,128	-		Psyr_2963	0.27	+0.3
3,552,128	-		Psyr_2963	0.27	+0.3
3,552,128	-		Psyr_2963	0.27	-1.7
3,552,173	-		Psyr_2963	0.33	+0.1
3,552,541	+		Psyr_2963	0.88	+1.5
3,552,541	+		Psyr_2963	0.88	+1.1
3,552,541	+		Psyr_2963	0.88	-0.2
3,552,541	+		Psyr_2963	0.88	+2.0
3,552,541	+		Psyr_2963	0.88	+0.6
3,552,542	-		Psyr_2963	0.88	-0.4
3,552,542	-		Psyr_2963	0.88	+0.6
3,552,771	-		Psyr_2964	0.22	+4.3
3,552,800	-		Psyr_2964	0.26	+0.6
3,552,841	+		Psyr_2964	0.33	+1.0
3,552,841	+		Psyr_2964	0.33	+0.1
3,552,841	+		Psyr_2964	0.33	-1.7
3,552,841	+		Psyr_2964	0.33	+0.6
3,552,841	+		Psyr_2964	0.33	+0.8
3,552,841	+		Psyr_2964	0.33	+1.8
3,552,841	+		Psyr_2964	0.33	-1.8
3,552,842	-		Psyr_2964	0.33	+1.2
3,552,842	-		Psyr_2964	0.33	-0.4
3,552,842	-		Psyr_2964	0.33	-1.8
3,552,842	-		Psyr_2964	0.33	+1.9
3,552,842	-		Psyr_2964	0.33	-0.2
3,552,842	-		Psyr_2964	0.33	+0.8
3,552,842	-		Psyr_2964	0.33	+0.9
3,552,842	-		Psyr_2964	0.33	+0.1
3,552,842	-		Psyr_2964	0.33	+0.3
3,552,845	+		Psyr_2964	0.33	+0.6
3,552,845	+		Psyr_2964	0.33	-0.0
3,552,845	+		Psyr_2964	0.33	+0.2
3,552,845	+		Psyr_2964	0.33	-1.1
3,552,845	+		Psyr_2964	0.33	+0.0
3,552,846	-		Psyr_2964	0.33	-0.1
3,552,846	-		Psyr_2964	0.33	-0.7
3,552,846	-		Psyr_2964	0.33	-0.8
3,552,846	-		Psyr_2964	0.33	+1.1
3,552,846	-		Psyr_2964	0.33	-0.2
3,552,846	-		Psyr_2964	0.33	+0.0
3,552,846	-		Psyr_2964	0.33	-0.7
3,552,846	-		Psyr_2964	0.33	+0.4
3,552,877	-		Psyr_2964	0.38	-0.6