Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2941

Experiment: KB with D-Salicin 240 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with D-Salicin 240 ug/ml
3,531,252	-		Psyr_2940	0.88	+0.0
3,531,391	-				+0.8
3,531,509	+				-1.8
3,531,510	-				+1.0
3,531,510	-				+0.7
3,531,565	+				+0.8
3,531,565	+				+0.2
3,531,585	+				+0.6
3,531,585	+				+1.1
3,531,585	+				+0.2
3,531,585	+				+1.6
3,531,586	-				+0.6
3,531,586	-				+0.0
3,531,586	-				+0.1
3,531,586	-				-0.4
3,531,631	-				-0.3
3,531,837	+				+0.3
3,531,838	-				-0.3
3,531,956	+				+1.1
3,531,957	-				-3.4
3,531,963	+				-0.1
3,531,963	+				+1.8
3,532,042	-				-0.5
3,532,042	-				+0.3
3,532,042	-				+0.2
3,532,042	-				+0.5
3,532,046	-				+0.2
3,532,074	+				+0.5
3,532,142	+				+0.2
3,532,143	-				-0.3
3,532,312	+				-0.8
3,532,312	+				+0.2
3,532,312	+				+0.4
3,532,312	+				+2.0
3,532,312	+				-1.0
3,532,312	+				+1.0
3,532,312	+				-0.6
3,532,313	-				+0.6
3,532,313	-				+0.1
3,532,313	-				+1.1
3,532,313	-				+1.2
3,532,316	+				+0.2
3,532,316	+				+0.1
3,532,316	+				+1.4
3,532,316	+				+2.0
3,532,316	+				-0.2
3,532,316	+				+0.6
3,532,316	+				+0.6
3,532,317	-				+0.2
3,532,317	-				-1.2
3,532,317	-				+1.2
3,532,325	+				+1.2
3,532,326	-				+0.2
3,532,340	+		Psyr_2941	0.11	-2.2
3,532,341	-		Psyr_2941	0.11	+1.7
3,532,341	-		Psyr_2941	0.11	+1.2
3,532,512	-		Psyr_2941	0.31	+1.0
3,532,609	-		Psyr_2941	0.42	-1.0
3,532,784	-		Psyr_2941	0.62	+0.6
3,532,784	-		Psyr_2941	0.62	-0.5
3,532,784	-		Psyr_2941	0.62	-0.4
3,532,784	-		Psyr_2941	0.62	-1.0
3,532,784	-		Psyr_2941	0.62	-0.2
3,532,808	-		Psyr_2941	0.65	+0.0
3,532,908	-		Psyr_2941	0.76	-1.7
3,532,997	+		Psyr_2941	0.86	-0.5
3,533,089	+				-0.3
3,533,093	-				+0.6
3,533,093	-				-0.5
3,533,093	-				+0.6
3,533,147	-				+1.0
3,533,586	+		Psyr_2942	0.62	-0.8
3,533,611	+		Psyr_2942	0.65	-0.4
3,533,611	+		Psyr_2942	0.65	+0.4
3,533,611	+		Psyr_2942	0.65	-0.2
3,533,612	-		Psyr_2942	0.66	+0.5
3,533,612	-		Psyr_2942	0.66	-0.0
3,533,612	-		Psyr_2942	0.66	-1.4
3,533,932	+				+0.4
3,533,958	+		Psyr_2943	0.13	+0.3
3,533,959	-		Psyr_2943	0.13	-0.9
3,533,977	-		Psyr_2943	0.16	-0.2
3,534,067	-		Psyr_2943	0.30	-0.1
3,534,067	-		Psyr_2943	0.30	-0.8
3,534,067	-		Psyr_2943	0.30	-0.6
3,534,067	-		Psyr_2943	0.30	+0.3
3,534,114	-		Psyr_2943	0.37	+1.0