Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2488

Experiment: KB with D-Salicin 240 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with D-Salicin 240 ug/ml
2,890,816	-				-1.0
2,890,816	-				+1.6
2,890,816	-				+1.8
2,890,939	+		Psyr_2487	0.13	-1.7
2,890,939	+		Psyr_2487	0.13	-0.4
2,890,940	-		Psyr_2487	0.13	+0.2
2,891,264	+		Psyr_2487	0.56	-1.4
2,891,264	+		Psyr_2487	0.56	+0.0
2,891,265	-		Psyr_2487	0.56	+1.3
2,891,396	+		Psyr_2487	0.74	+1.8
2,891,396	+		Psyr_2487	0.74	-0.4
2,891,548	+				+0.5
2,891,549	-				-1.7
2,891,549	-				-0.4
2,891,898	+		Psyr_2488	0.79	+0.4
2,891,898	+		Psyr_2488	0.79	-1.1
2,891,898	+		Psyr_2488	0.79	-2.7
2,891,898	+		Psyr_2488	0.79	-1.9
2,891,898	+		Psyr_2488	0.79	-2.2
2,891,899	-		Psyr_2488	0.80	-1.5
2,891,899	-		Psyr_2488	0.80	-0.8
2,891,899	-		Psyr_2488	0.80	-0.6
2,891,900	+		Psyr_2488	0.80	+0.6
2,891,900	+		Psyr_2488	0.80	-1.6
2,891,901	-		Psyr_2488	0.80	-1.4
2,891,938	-				-0.1
2,892,007	+				-0.3
2,892,007	+				-0.7
2,892,100	+				+0.0
2,892,100	+				-1.8
2,892,187	+				-0.1
2,892,228	+				+0.2
2,892,229	-				+0.6
2,892,238	+				+0.8
2,892,319	+				+0.1
2,892,319	+				+0.4
2,892,493	+				+0.1
2,892,673	+		Psyr_2489	0.18	-0.4
2,892,674	-		Psyr_2489	0.18	-0.1
2,892,674	-		Psyr_2489	0.18	-1.1