Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2459

Experiment: KB with D-Salicin 240 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with D-Salicin 240 ug/ml
2,846,082	+		Psyr_2457	0.69	+0.5
2,846,082	+		Psyr_2457	0.69	-0.5
2,846,083	-		Psyr_2457	0.69	+0.4
2,846,124	+		Psyr_2457	0.73	-0.4
2,846,124	+		Psyr_2457	0.73	-0.1
2,846,266	-		Psyr_2457	0.86	-3.1
2,846,266	-		Psyr_2457	0.86	+0.9
2,846,266	-		Psyr_2457	0.86	-0.7
2,846,344	-				-1.3
2,846,413	+				-3.2
2,846,413	+				+0.2
2,846,414	-				-0.1
2,846,418	-				+0.8
2,846,449	+				-0.8
2,846,450	-				-0.6
2,846,500	+				+0.8
2,846,502	+				+1.0
2,846,502	+				-0.3
2,846,502	+				-0.1
2,846,503	-				-0.7
2,846,503	-				+0.6
2,846,503	-				+1.9
2,846,547	+				+1.5
2,846,548	-				+0.1
2,846,549	+				+0.0
2,846,550	-				-0.2
2,846,550	-				+0.1
2,846,550	-				-0.6
2,846,601	-				+0.9
2,846,629	-				-0.0
2,846,921	+				-0.6
2,846,933	+				+0.7
2,846,933	+				-0.2
2,846,959	-				+0.6
2,846,963	+				+0.3
2,846,963	+				+0.1
2,846,964	-				-1.4
2,846,964	-				-0.4
2,846,964	-				+1.6
2,846,964	-				-0.1
2,846,964	-				-0.0
2,847,008	-				+0.5
2,847,092	+		Psyr_2459	0.13	+1.8
2,847,093	-		Psyr_2459	0.13	+0.0
2,847,110	+		Psyr_2459	0.15	+1.6
2,847,110	+		Psyr_2459	0.15	+3.2
2,847,111	-		Psyr_2459	0.16	+0.8
2,847,111	-		Psyr_2459	0.16	+1.4
2,847,302	+		Psyr_2459	0.42	-0.2
2,847,387	+		Psyr_2459	0.54	-0.1
2,847,387	+		Psyr_2459	0.54	+0.6
2,847,387	+		Psyr_2459	0.54	-0.3
2,847,387	+		Psyr_2459	0.54	+1.1
2,847,387	+		Psyr_2459	0.54	+0.3
2,847,388	-		Psyr_2459	0.55	-0.7
2,847,388	-		Psyr_2459	0.55	+0.7
2,847,388	-		Psyr_2459	0.55	-0.7
2,847,388	-		Psyr_2459	0.55	-0.2
2,847,390	-		Psyr_2459	0.55	+0.7
2,847,390	-		Psyr_2459	0.55	+0.8
2,847,515	-		Psyr_2459	0.72	+0.3
2,847,515	-		Psyr_2459	0.72	+1.4
2,847,525	+		Psyr_2459	0.74	+0.7
2,847,526	-		Psyr_2459	0.74	-0.1
2,847,526	-		Psyr_2459	0.74	+0.8
2,847,526	-		Psyr_2459	0.74	-0.9
2,847,526	-		Psyr_2459	0.74	+1.9
2,847,526	-		Psyr_2459	0.74	+0.1
2,847,655	+				+0.3
2,847,656	-				-0.8
2,847,690	+				+0.5
2,847,697	+				+0.8
2,847,698	-				-1.1
2,847,698	-				+0.6
2,847,698	-				-0.7
2,847,698	-				+0.8
2,847,786	-				+1.6
2,847,858	-				+1.6
2,847,911	+				+1.5
2,848,069	+		Psyr_2460	0.15	-1.5
2,848,069	+		Psyr_2460	0.15	+1.3
2,848,069	+		Psyr_2460	0.15	+1.4
2,848,069	+		Psyr_2460	0.15	+0.9
2,848,070	-		Psyr_2460	0.15	-1.0
2,848,070	-		Psyr_2460	0.15	+0.6
2,848,195	+		Psyr_2460	0.27	+1.4
2,848,195	+		Psyr_2460	0.27	-0.4
2,848,395	-		Psyr_2460	0.47	+1.8
2,848,426	+		Psyr_2460	0.50	+1.0
2,848,426	+		Psyr_2460	0.50	-0.1
2,848,426	+		Psyr_2460	0.50	+0.4
2,848,426	+		Psyr_2460	0.50	-0.4
2,848,426	+		Psyr_2460	0.50	+0.1
2,848,427	-		Psyr_2460	0.50	-1.7
2,848,427	-		Psyr_2460	0.50	+1.1
2,848,570	+		Psyr_2460	0.64	+0.9
2,848,570	+		Psyr_2460	0.64	-0.2
2,848,571	-		Psyr_2460	0.64	-0.3
2,848,571	-		Psyr_2460	0.64	-1.2
2,848,571	-		Psyr_2460	0.64	+0.3