Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2411

Experiment: KB with D-Salicin 240 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with D-Salicin 240 ug/ml
2,791,569	-		Psyr_2410	0.35	-0.8
2,791,625	+		Psyr_2410	0.40	-0.2
2,791,625	+		Psyr_2410	0.40	+2.2
2,791,626	-		Psyr_2410	0.40	+2.1
2,791,626	-		Psyr_2410	0.40	-1.5
2,791,626	-		Psyr_2410	0.40	+1.0
2,791,626	-		Psyr_2410	0.40	-1.4
2,791,626	-		Psyr_2410	0.40	+0.1
2,791,709	+		Psyr_2410	0.48	-0.2
2,791,709	+		Psyr_2410	0.48	+0.1
2,791,709	+		Psyr_2410	0.48	-1.4
2,791,710	-		Psyr_2410	0.48	+0.3
2,791,710	-		Psyr_2410	0.48	-1.7
2,792,147	+		Psyr_2410	0.86	-0.4
2,792,147	+		Psyr_2410	0.86	+0.4
2,792,283	+				+0.5
2,792,284	-				-0.1
2,792,430	+				-0.8
2,792,521	-		Psyr_2411	0.12	-1.3
2,792,521	-		Psyr_2411	0.12	-0.3
2,792,521	-		Psyr_2411	0.12	-0.1
2,792,638	-		Psyr_2411	0.26	-1.4
2,792,638	-		Psyr_2411	0.26	-0.6
2,792,918	+		Psyr_2411	0.58	-0.1
2,792,919	-		Psyr_2411	0.58	-0.2
2,792,945	+		Psyr_2411	0.61	+0.6
2,793,198	+				-1.6
2,793,198	+				+1.9
2,793,198	+				+0.2
2,793,198	+				-0.1
2,793,198	+				-0.1
2,793,198	+				-1.4
2,793,198	+				+0.1
2,793,198	+				-1.2
2,793,198	+				+0.0
2,793,199	-				+0.7
2,793,199	-				-0.7
2,793,199	-				-0.9
2,793,199	-				-1.4
2,793,199	-				-2.2
2,793,199	-				-0.1
2,793,199	-				+0.4
2,793,199	-				+1.0
2,793,229	-				-2.0
2,793,276	+				+0.6
2,793,277	-				+0.8
2,793,277	-				-1.4
2,793,296	-				+0.0
2,793,354	+				-2.1
2,793,355	-				-0.5
2,793,355	-				+1.2
2,793,355	-				+0.9
2,793,388	-				-1.4
2,793,388	-				+0.2
2,793,388	-				+1.2
2,793,404	+				-0.5
2,793,572	+				+2.2
2,793,572	+				-0.8
2,793,573	-				-0.0
2,793,573	-				+0.6
2,793,573	-				-0.6
2,793,573	-				-0.3
2,793,573	-				-1.7
2,793,574	+				+3.4
2,793,574	+				-0.4
2,793,574	+				+1.0
2,793,574	+				+0.3
2,793,574	+				-0.2
2,793,574	+				-0.8
2,793,574	+				+0.0
2,793,574	+				-2.0
2,793,574	+				-1.0
2,793,574	+				-0.4
2,793,574	+				-0.1
2,793,575	-				-1.3
2,793,575	-				+0.4
2,793,575	-				-1.8
2,793,575	-				+0.6
2,793,575	-				+0.6
2,793,575	-				+0.8
2,793,576	+				+0.4
2,793,576	+				-1.7
2,793,576	+				-0.7
2,793,576	+				+0.8
2,793,576	+				-0.6
2,793,576	+				+0.0
2,793,576	+				+3.9
2,793,576	+				+0.5
2,793,576	+				+1.7
2,793,576	+				-0.4
2,793,576	+				-0.6
2,793,576	+				-0.2
2,793,576	+				+0.3
2,793,577	-				-0.9
2,793,577	-				-1.4
2,793,577	-				+0.0
2,793,577	-				+1.7
2,793,577	-				-1.1
2,793,577	-				-1.0
2,793,577	-				-0.6
2,793,577	-				-0.8
2,793,577	-				-0.7
2,793,577	-				+0.6
2,793,577	-				+0.6
2,793,577	-				+0.3
2,793,577	-				+1.6
2,793,717	+		Psyr_2412	0.12	-1.1
2,793,718	-		Psyr_2412	0.12	+1.1
2,793,734	-		Psyr_2412	0.13	+0.6
2,793,734	-		Psyr_2412	0.13	+0.7
2,793,763	+		Psyr_2412	0.14	-0.4
2,793,763	+		Psyr_2412	0.14	-1.0
2,793,792	+		Psyr_2412	0.15	+0.4
2,793,792	+		Psyr_2412	0.15	-0.2
2,793,792	+		Psyr_2412	0.15	+0.6
2,793,792	+		Psyr_2412	0.15	+0.3
2,793,792	+		Psyr_2412	0.15	-0.4
2,793,793	-		Psyr_2412	0.15	-0.7
2,793,793	-		Psyr_2412	0.15	-1.0
2,793,793	-		Psyr_2412	0.15	+3.6
2,793,793	-		Psyr_2412	0.15	+2.4
2,793,793	-		Psyr_2412	0.15	-0.2
2,794,037	+		Psyr_2412	0.23	+0.3
2,794,037	+		Psyr_2412	0.23	+0.6
2,794,038	-		Psyr_2412	0.24	+0.5
2,794,116	+		Psyr_2412	0.26	+0.6
2,794,117	-		Psyr_2412	0.26	-3.0
2,794,188	+		Psyr_2412	0.29	+0.5