Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2407

Experiment: KB with D-Salicin 240 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with D-Salicin 240 ug/ml
2,786,985	+		Psyr_2405	0.62	+1.0
2,786,986	-		Psyr_2405	0.62	-0.3
2,786,986	-		Psyr_2405	0.62	-0.7
2,787,317	+				-0.3
2,787,485	+				+0.6
2,787,686	+		Psyr_2406	0.50	+1.0
2,787,771	-		Psyr_2406	0.67	+0.7
2,787,771	-		Psyr_2406	0.67	-0.3
2,787,771	-		Psyr_2406	0.67	+0.6
2,787,832	-		Psyr_2406	0.80	+0.7
2,787,911	+				-0.3
2,787,912	-				-0.2
2,787,912	-				-1.3
2,787,925	+				-0.0
2,787,925	+				+0.3
2,787,925	+				+0.1
2,787,925	+				+0.2
2,787,926	-				-0.1
2,787,926	-				-0.6
2,787,926	-				+1.2
2,787,926	-				-0.4
2,788,105	+		Psyr_2407	0.11	+0.4
2,788,106	-		Psyr_2407	0.11	+0.6
2,788,106	-		Psyr_2407	0.11	-1.5
2,788,106	-		Psyr_2407	0.11	+0.0
2,788,106	-		Psyr_2407	0.11	+0.4
2,788,106	-		Psyr_2407	0.11	+1.1
2,788,120	+		Psyr_2407	0.12	+0.9
2,788,120	+		Psyr_2407	0.12	-0.2
2,788,120	+		Psyr_2407	0.12	-0.3
2,788,120	+		Psyr_2407	0.12	-0.6
2,788,121	-		Psyr_2407	0.12	-2.1
2,788,318	+		Psyr_2407	0.25	-0.3
2,788,318	+		Psyr_2407	0.25	-0.2
2,788,319	-		Psyr_2407	0.25	-0.2
2,788,319	-		Psyr_2407	0.25	-0.3
2,788,319	-		Psyr_2407	0.25	-0.0
2,788,319	-		Psyr_2407	0.25	+0.8
2,788,319	-		Psyr_2407	0.25	-0.5
2,788,326	+		Psyr_2407	0.26	-1.4
2,788,327	-		Psyr_2407	0.26	+0.2
2,788,327	-		Psyr_2407	0.26	-1.5
2,788,415	+		Psyr_2407	0.32	-0.1
2,788,416	-		Psyr_2407	0.32	-0.5
2,788,530	+		Psyr_2407	0.40	-1.4
2,788,590	+		Psyr_2407	0.44	+1.6
2,788,590	+		Psyr_2407	0.44	-0.6
2,788,591	-		Psyr_2407	0.44	+0.4
2,788,749	-		Psyr_2407	0.54	-0.2
2,788,953	+		Psyr_2407	0.68	-1.3
2,789,013	+		Psyr_2407	0.72	+0.6
2,789,014	-		Psyr_2407	0.72	+0.6
2,789,083	-		Psyr_2407	0.77	+0.3
2,789,539	-		Psyr_2408	0.14	+0.6
2,789,684	+		Psyr_2408	0.31	-0.7
2,789,684	+		Psyr_2408	0.31	-0.7
2,789,684	+		Psyr_2408	0.31	-0.2
2,789,685	-		Psyr_2408	0.31	+0.9
2,789,685	-		Psyr_2408	0.31	-0.7
2,789,685	-		Psyr_2408	0.31	-0.8
2,789,688	+		Psyr_2408	0.31	+0.2
2,789,689	-		Psyr_2408	0.31	+0.1
2,789,689	-		Psyr_2408	0.31	-1.1
2,789,711	+		Psyr_2408	0.34	+0.4
2,789,711	+		Psyr_2408	0.34	+0.1
2,789,711	+		Psyr_2408	0.34	+0.1
2,789,711	+		Psyr_2408	0.34	+0.2
2,789,712	-		Psyr_2408	0.34	-0.5
2,789,712	-		Psyr_2408	0.34	+0.8
2,789,712	-		Psyr_2408	0.34	-0.6
2,790,129	-		Psyr_2408	0.83	-1.4
2,790,228	-				-1.9
2,790,228	-				+0.6
2,790,346	-				+0.6