Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005448

Experiment: RCH2_defined_glucose_5mM with Lumazine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose_5mM with Lumazine 5 mM
1,723,029	-		ABIE53_005447	0.43	-2.1
1,723,309	+		ABIE53_005447	0.64	-1.5
1,723,310	-		ABIE53_005447	0.64	+2.4
1,723,429	+		ABIE53_005447	0.73	-1.4
1,723,429	+		ABIE53_005447	0.73	+0.4
1,723,429	+		ABIE53_005447	0.73	+0.2
1,723,430	-		ABIE53_005447	0.73	+0.3
1,723,543	+		ABIE53_005447	0.82	-1.0
1,723,543	+		ABIE53_005447	0.82	-0.8
1,723,544	-		ABIE53_005447	0.82	-2.4
1,723,544	-		ABIE53_005447	0.82	+0.6
1,723,769	+				+0.3
1,723,953	+		ABIE53_005448	0.14	+1.4
1,723,957	-		ABIE53_005448	0.15	-1.9
1,724,155	+		ABIE53_005448	0.35	+0.2
1,724,155	+		ABIE53_005448	0.35	-0.2
1,724,155	+		ABIE53_005448	0.35	-0.4
1,724,155	+		ABIE53_005448	0.35	-0.9
1,724,156	-		ABIE53_005448	0.35	-0.8
1,724,156	-		ABIE53_005448	0.35	-0.8
1,724,156	-		ABIE53_005448	0.35	-0.3
1,724,157	+		ABIE53_005448	0.35	+0.2
1,724,157	+		ABIE53_005448	0.35	+0.2
1,724,157	+		ABIE53_005448	0.35	+1.8
1,724,158	-		ABIE53_005448	0.35	-0.4
1,724,158	-		ABIE53_005448	0.35	-0.8
1,724,244	+		ABIE53_005448	0.44	-0.1
1,724,245	-		ABIE53_005448	0.44	+0.6
1,724,245	-		ABIE53_005448	0.44	-0.8
1,724,257	-		ABIE53_005448	0.46	+0.8
1,724,257	-		ABIE53_005448	0.46	-0.3
1,724,257	-		ABIE53_005448	0.46	-0.2
1,724,340	-		ABIE53_005448	0.54	-1.3
1,724,348	-		ABIE53_005448	0.55	+0.2
1,724,388	-		ABIE53_005448	0.59	-1.2
1,724,388	-		ABIE53_005448	0.59	-1.5
1,724,574	+		ABIE53_005448	0.79	-1.8
1,724,577	-		ABIE53_005448	0.79	-1.0
1,724,848	+				+0.2
1,724,848	+				+1.2
1,724,848	+				-0.9
1,724,849	-				-2.0
1,724,959	+				+0.6
1,724,960	-				-1.0
1,724,960	-				+0.8
1,725,365	-		ABIE53_005449	0.40	+0.3
1,725,365	-		ABIE53_005449	0.40	+1.2
1,725,365	-		ABIE53_005449	0.40	+0.6
1,725,412	+		ABIE53_005449	0.44	-0.8
1,725,413	-		ABIE53_005449	0.44	+0.8
1,725,413	-		ABIE53_005449	0.44	-0.4
1,725,572	-		ABIE53_005449	0.58	+0.4
1,725,592	+		ABIE53_005449	0.59	-1.8
1,725,661	+		ABIE53_005449	0.65	-1.6
1,725,662	-		ABIE53_005449	0.65	-0.8
1,725,662	-		ABIE53_005449	0.65	+1.2