Experiment: KB with Quercetin 360 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3265 and Psyr_3266 are separated by 466 nucleotides Psyr_3266 and Psyr_3267 are separated by 66 nucleotides Psyr_3267 and Psyr_3268 are separated by 51 nucleotides
Psyr_3265: Psyr_3265 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 3,910,069 to 3,911,004
_3265
Psyr_3266: Psyr_3266 - Oxidoreductase, N-terminal:Oxidoreductase, C-terminal, at 3,911,471 to 3,912,490
_3266
Psyr_3267: Psyr_3267 - AP endonuclease, family 2, at 3,912,557 to 3,913,417
_3267
Psyr_3268: Psyr_3268 - myo-inositol 2-dehydrogenase, at 3,913,469 to 3,914,479
_3268
Position (kb) 3911
3912
3913 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 3910.571 kb on + strand, within Psyr_3265 at 3910.571 kb on + strand, within Psyr_3265 at 3910.571 kb on + strand, within Psyr_3265 at 3910.572 kb on - strand, within Psyr_3265 at 3910.572 kb on - strand, within Psyr_3265 at 3910.664 kb on + strand, within Psyr_3265 at 3910.664 kb on + strand, within Psyr_3265 at 3910.664 kb on + strand, within Psyr_3265 at 3910.665 kb on - strand, within Psyr_3265 at 3910.869 kb on + strand, within Psyr_3265 at 3910.869 kb on + strand, within Psyr_3265 at 3910.883 kb on + strand, within Psyr_3265 at 3910.883 kb on + strand, within Psyr_3265 at 3910.883 kb on + strand, within Psyr_3265 at 3910.932 kb on + strand at 3911.023 kb on + strand at 3911.024 kb on - strand at 3911.035 kb on - strand at 3911.226 kb on + strand at 3911.226 kb on + strand at 3911.226 kb on + strand at 3911.227 kb on - strand at 3911.227 kb on - strand at 3911.227 kb on - strand at 3911.230 kb on + strand at 3911.230 kb on + strand at 3911.231 kb on - strand at 3911.231 kb on - strand at 3911.231 kb on - strand at 3911.473 kb on - strand at 3911.925 kb on + strand, within Psyr_3266 at 3911.926 kb on - strand, within Psyr_3266 at 3911.926 kb on - strand, within Psyr_3266 at 3911.951 kb on + strand, within Psyr_3266 at 3911.951 kb on + strand, within Psyr_3266 at 3912.142 kb on + strand, within Psyr_3266 at 3912.150 kb on - strand, within Psyr_3266 at 3912.450 kb on + strand at 3912.494 kb on + strand at 3912.504 kb on - strand at 3912.540 kb on + strand at 3912.541 kb on - strand at 3912.541 kb on - strand at 3912.541 kb on - strand at 3912.665 kb on - strand, within Psyr_3267 at 3912.765 kb on + strand, within Psyr_3267 at 3912.793 kb on + strand, within Psyr_3267 at 3912.793 kb on + strand, within Psyr_3267 at 3912.795 kb on + strand, within Psyr_3267 at 3912.795 kb on + strand, within Psyr_3267 at 3912.795 kb on + strand, within Psyr_3267 at 3912.795 kb on + strand, within Psyr_3267 at 3912.795 kb on + strand, within Psyr_3267 at 3912.795 kb on + strand, within Psyr_3267 at 3912.795 kb on + strand, within Psyr_3267 at 3912.795 kb on + strand, within Psyr_3267 at 3912.795 kb on + strand, within Psyr_3267 at 3912.795 kb on + strand, within Psyr_3267 at 3912.795 kb on + strand, within Psyr_3267 at 3912.796 kb on - strand, within Psyr_3267 at 3912.796 kb on - strand, within Psyr_3267 at 3912.796 kb on - strand, within Psyr_3267 at 3912.796 kb on - strand, within Psyr_3267 at 3912.796 kb on - strand, within Psyr_3267 at 3912.876 kb on + strand, within Psyr_3267 at 3912.906 kb on + strand, within Psyr_3267 at 3912.906 kb on + strand, within Psyr_3267 at 3912.907 kb on - strand, within Psyr_3267 at 3912.907 kb on - strand, within Psyr_3267 at 3912.907 kb on - strand, within Psyr_3267 at 3912.907 kb on - strand, within Psyr_3267 at 3913.002 kb on - strand, within Psyr_3267 at 3913.169 kb on - strand, within Psyr_3267 at 3913.201 kb on - strand, within Psyr_3267 at 3913.287 kb on + strand, within Psyr_3267 at 3913.294 kb on - strand, within Psyr_3267 at 3913.294 kb on - strand, within Psyr_3267 at 3913.332 kb on + strand at 3913.332 kb on + strand at 3913.332 kb on + strand at 3913.333 kb on - strand at 3913.333 kb on - strand at 3913.333 kb on - strand at 3913.333 kb on - strand at 3913.389 kb on + strand at 3913.389 kb on + strand at 3913.389 kb on + strand at 3913.389 kb on + strand at 3913.390 kb on - strand at 3913.390 kb on - strand at 3913.390 kb on - strand at 3913.395 kb on + strand at 3913.395 kb on + strand at 3913.395 kb on + strand at 3913.395 kb on + strand at 3913.395 kb on + strand at 3913.395 kb on + strand at 3913.395 kb on + strand at 3913.395 kb on + strand at 3913.396 kb on - strand at 3913.396 kb on - strand at 3913.396 kb on - strand at 3913.411 kb on + strand at 3913.430 kb on + strand at 3913.430 kb on + strand at 3913.430 kb on + strand at 3913.431 kb on - strand at 3913.431 kb on - strand at 3913.448 kb on + strand at 3913.448 kb on + strand at 3913.448 kb on + strand at 3913.448 kb on + strand at 3913.449 kb on - strand at 3913.449 kb on - strand at 3913.449 kb on - strand at 3913.449 kb on - strand at 3913.449 kb on - strand at 3913.449 kb on - strand at 3913.474 kb on + strand at 3913.475 kb on - strand at 3913.475 kb on - strand at 3913.475 kb on - strand at 3913.476 kb on + strand at 3913.476 kb on + strand at 3913.476 kb on + strand at 3913.476 kb on + strand at 3913.476 kb on + strand at 3913.476 kb on + strand at 3913.476 kb on + strand at 3913.476 kb on + strand at 3913.476 kb on - strand at 3913.477 kb on - strand at 3913.477 kb on - strand at 3913.477 kb on - strand at 3913.477 kb on - strand at 3913.477 kb on - strand at 3913.477 kb on - strand at 3913.477 kb on - strand at 3913.477 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Quercetin 360 ug/ml remove 3,910,571 + Psyr_3265 0.54 +0.9 3,910,571 + Psyr_3265 0.54 +1.3 3,910,571 + Psyr_3265 0.54 +0.1 3,910,572 - Psyr_3265 0.54 -0.2 3,910,572 - Psyr_3265 0.54 +1.0 3,910,664 + Psyr_3265 0.64 -0.2 3,910,664 + Psyr_3265 0.64 +1.1 3,910,664 + Psyr_3265 0.64 -1.0 3,910,665 - Psyr_3265 0.64 -0.1 3,910,869 + Psyr_3265 0.85 -0.1 3,910,869 + Psyr_3265 0.85 -0.4 3,910,883 + Psyr_3265 0.87 +0.4 3,910,883 + Psyr_3265 0.87 -0.7 3,910,883 + Psyr_3265 0.87 -0.6 3,910,932 + +0.2 3,911,023 + -1.2 3,911,024 - -0.1 3,911,035 - -0.2 3,911,226 + -0.1 3,911,226 + +2.3 3,911,226 + -0.8 3,911,227 - -1.4 3,911,227 - -1.0 3,911,227 - +0.1 3,911,230 + -0.9 3,911,230 + +0.0 3,911,231 - +0.8 3,911,231 - -0.9 3,911,231 - +0.3 3,911,473 - -0.9 3,911,925 + Psyr_3266 0.45 -1.4 3,911,926 - Psyr_3266 0.45 -3.4 3,911,926 - Psyr_3266 0.45 -0.3 3,911,951 + Psyr_3266 0.47 +0.1 3,911,951 + Psyr_3266 0.47 +1.9 3,912,142 + Psyr_3266 0.66 -0.9 3,912,150 - Psyr_3266 0.67 -0.3 3,912,450 + -2.2 3,912,494 + +0.0 3,912,504 - +1.5 3,912,540 + -1.7 3,912,541 - +0.2 3,912,541 - -0.2 3,912,541 - -0.9 3,912,665 - Psyr_3267 0.13 +0.6 3,912,765 + Psyr_3267 0.24 -2.8 3,912,793 + Psyr_3267 0.27 -0.5 3,912,793 + Psyr_3267 0.27 -0.6 3,912,795 + Psyr_3267 0.28 -1.3 3,912,795 + Psyr_3267 0.28 -4.1 3,912,795 + Psyr_3267 0.28 -0.2 3,912,795 + Psyr_3267 0.28 -0.5 3,912,795 + Psyr_3267 0.28 +0.7 3,912,795 + Psyr_3267 0.28 -0.7 3,912,795 + Psyr_3267 0.28 +1.9 3,912,795 + Psyr_3267 0.28 -1.6 3,912,795 + Psyr_3267 0.28 +0.1 3,912,795 + Psyr_3267 0.28 +0.2 3,912,795 + Psyr_3267 0.28 -1.0 3,912,796 - Psyr_3267 0.28 -0.4 3,912,796 - Psyr_3267 0.28 -0.3 3,912,796 - Psyr_3267 0.28 +1.4 3,912,796 - Psyr_3267 0.28 -2.0 3,912,796 - Psyr_3267 0.28 -1.8 3,912,876 + Psyr_3267 0.37 -0.3 3,912,906 + Psyr_3267 0.41 +0.0 3,912,906 + Psyr_3267 0.41 +0.3 3,912,907 - Psyr_3267 0.41 +0.3 3,912,907 - Psyr_3267 0.41 +0.3 3,912,907 - Psyr_3267 0.41 -0.3 3,912,907 - Psyr_3267 0.41 +0.3 3,913,002 - Psyr_3267 0.52 -0.2 3,913,169 - Psyr_3267 0.71 -0.0 3,913,201 - Psyr_3267 0.75 -0.3 3,913,287 + Psyr_3267 0.85 +1.3 3,913,294 - Psyr_3267 0.86 -1.5 3,913,294 - Psyr_3267 0.86 +1.2 3,913,332 + -0.3 3,913,332 + +0.0 3,913,332 + -1.6 3,913,333 - -0.2 3,913,333 - +0.8 3,913,333 - +1.1 3,913,333 - +2.1 3,913,389 + +0.4 3,913,389 + +0.0 3,913,389 + +0.4 3,913,389 + -0.1 3,913,390 - +0.3 3,913,390 - -0.1 3,913,390 - +0.9 3,913,395 + -0.4 3,913,395 + +0.3 3,913,395 + -2.8 3,913,395 + -1.3 3,913,395 + -0.5 3,913,395 + -0.7 3,913,395 + -0.6 3,913,395 + -0.2 3,913,396 - -0.0 3,913,396 - +0.5 3,913,396 - +0.0 3,913,411 + -1.1 3,913,430 + +1.1 3,913,430 + +0.3 3,913,430 + -0.0 3,913,431 - +0.4 3,913,431 - +2.3 3,913,448 + -2.1 3,913,448 + +0.2 3,913,448 + +1.2 3,913,448 + -2.3 3,913,449 - +1.0 3,913,449 - +0.5 3,913,449 - +1.4 3,913,449 - +1.1 3,913,449 - -0.8 3,913,449 - -2.3 3,913,474 + -0.3 3,913,475 - +0.3 3,913,475 - +2.3 3,913,475 - +0.1 3,913,476 + +0.1 3,913,476 + +0.2 3,913,476 + -1.7 3,913,476 + -2.3 3,913,476 + +0.1 3,913,476 + -2.1 3,913,476 + +1.0 3,913,476 + +0.8 3,913,476 - +0.7 3,913,477 - -0.4 3,913,477 - -2.0 3,913,477 - -0.3 3,913,477 - +0.3 3,913,477 - +0.2 3,913,477 - -0.4 3,913,477 - -0.4 3,913,477 - +0.9
Or see this region's nucleotide sequence