Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3118

Experiment: KB with Quercetin 360 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Quercetin 360 ug/ml
3,737,205	+				+0.1
3,737,205	+				-1.6
3,737,206	-				+0.4
3,737,208	+				-0.7
3,737,208	+				-1.3
3,737,208	+				+1.7
3,737,208	+				-0.3
3,737,209	-				+1.6
3,737,209	-				+2.4
3,737,209	-				-1.2
3,737,227	+				+1.9
3,737,228	-				-0.3
3,737,343	+				+2.0
3,737,382	-				-1.3
3,737,620	+				-0.3
3,738,034	+				-0.9
3,738,218	-		Psyr_3118	0.18	-0.5
3,738,404	-		Psyr_3118	0.44	+0.1
3,738,639	+		Psyr_3118	0.76	-1.6
3,738,640	-		Psyr_3118	0.77	-0.6
3,738,640	-		Psyr_3118	0.77	-1.5
3,738,833	+				-0.2
3,738,833	+				-0.5
3,739,022	+				+0.7
3,739,022	+				-1.3
3,739,022	+				-0.7
3,739,022	+				+0.1
3,739,022	+				-0.7
3,739,023	-				-0.2
3,739,023	-				+0.3
3,739,023	-				+0.8
3,739,023	-				+0.7
3,739,023	-				+0.0
3,739,023	-				+0.3
3,739,023	-				-0.5
3,739,047	-				+1.3
3,739,066	+				-0.1
3,739,067	-				+0.4
3,739,122	+				+0.1
3,739,123	-				-0.0
3,739,123	-				+0.1
3,739,211	-				+0.2
3,739,359	+				-0.6
3,739,359	+				-0.6
3,739,359	+				-1.6
3,739,359	+				-2.1
3,739,359	+				+1.0
3,739,360	-				-0.3
3,739,360	-				-0.8
3,739,360	-				-1.7
3,739,360	-				-1.3
3,739,465	-		Psyr_3119	0.16	+0.6
3,739,517	+		Psyr_3119	0.20	-0.6
3,739,517	+		Psyr_3119	0.20	+0.0
3,739,518	-		Psyr_3119	0.20	-0.5
3,739,518	-		Psyr_3119	0.20	-0.9
3,739,518	-		Psyr_3119	0.20	+2.3
3,739,597	-		Psyr_3119	0.26	-0.5
3,739,597	-		Psyr_3119	0.26	-0.6
3,739,653	+		Psyr_3119	0.30	-0.9
3,739,653	+		Psyr_3119	0.30	-0.9
3,739,653	+		Psyr_3119	0.30	-0.1
3,739,654	-		Psyr_3119	0.30	-0.0
3,739,654	-		Psyr_3119	0.30	+0.1
3,739,654	-		Psyr_3119	0.30	-0.1
3,739,654	-		Psyr_3119	0.30	+0.2
3,739,654	-		Psyr_3119	0.30	+2.3
3,739,656	+		Psyr_3119	0.31	-1.2
3,739,656	+		Psyr_3119	0.31	+0.1
3,739,656	+		Psyr_3119	0.31	+1.3
3,739,656	+		Psyr_3119	0.31	-0.7
3,739,656	+		Psyr_3119	0.31	-0.0
3,739,656	+		Psyr_3119	0.31	+0.1
3,739,657	-		Psyr_3119	0.31	-1.4
3,739,657	-		Psyr_3119	0.31	+0.8
3,739,657	-		Psyr_3119	0.31	-0.5
3,739,657	-		Psyr_3119	0.31	+1.3
3,739,806	+		Psyr_3119	0.42	+0.4
3,739,806	+		Psyr_3119	0.42	-1.0
3,739,806	+		Psyr_3119	0.42	-0.1
3,739,806	+		Psyr_3119	0.42	-0.0