Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2475

Experiment: KB with Quercetin 360 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Quercetin 360 ug/ml
2,868,771	+		Psyr_2474	0.78	-0.0
2,868,771	+		Psyr_2474	0.78	+0.4
2,868,772	-		Psyr_2474	0.78	-1.4
2,868,918	+		Psyr_2474	0.90	+1.7
2,868,918	+		Psyr_2474	0.90	-0.6
2,868,918	+		Psyr_2474	0.90	+0.5
2,868,918	+		Psyr_2474	0.90	+1.7
2,868,918	+		Psyr_2474	0.90	-2.3
2,868,918	+		Psyr_2474	0.90	-0.3
2,868,924	+				+0.0
2,868,924	+				+0.1
2,868,924	+				-0.1
2,868,938	+				+0.4
2,868,938	+				-0.4
2,868,938	+				+1.1
2,868,938	+				-3.2
2,868,939	-				+1.1
2,868,939	-				+1.0
2,868,993	+				+0.9
2,868,994	-				+1.5
2,868,994	-				+2.3
2,869,008	+				+0.5
2,869,008	+				-1.7
2,869,008	+				+0.2
2,869,008	+				-2.2
2,869,008	+				+0.3
2,869,008	+				-0.5
2,869,008	+				+1.8
2,869,008	+				-0.4
2,869,008	+				+0.7
2,869,008	+				-0.7
2,869,008	+				+0.3
2,869,008	+				-0.8
2,869,009	-				-0.5
2,869,009	-				+1.1
2,869,009	-				-0.2
2,869,009	-				-2.0
2,869,009	-				-0.3
2,869,009	-				+0.4
2,869,009	-				+0.5
2,869,009	-				+0.3
2,869,009	-				+0.1
2,869,009	-				-1.0
2,869,009	-				+0.6
2,869,010	+				+0.5
2,869,010	+				+0.6
2,869,010	+				-1.6
2,869,011	-				-2.5
2,869,114	+				-0.1
2,869,257	-		Psyr_2475	0.15	-1.0
2,869,454	+		Psyr_2475	0.30	-1.0
2,869,455	-		Psyr_2475	0.30	+0.2
2,869,560	-		Psyr_2475	0.38	+0.7
2,869,560	-		Psyr_2475	0.38	-0.1
2,869,563	+		Psyr_2475	0.38	-0.3
2,869,563	+		Psyr_2475	0.38	-1.9
2,869,563	+		Psyr_2475	0.38	-2.5
2,869,564	-		Psyr_2475	0.38	-1.1
2,869,564	-		Psyr_2475	0.38	-2.0
2,869,564	-		Psyr_2475	0.38	+0.2
2,869,564	-		Psyr_2475	0.38	+0.8
2,869,564	-		Psyr_2475	0.38	+1.3
2,869,569	+		Psyr_2475	0.38	-2.3
2,869,569	+		Psyr_2475	0.38	-1.0
2,869,570	-		Psyr_2475	0.38	-1.1
2,869,815	+		Psyr_2475	0.57	-2.0
2,869,816	-		Psyr_2475	0.57	-2.0
2,869,842	+		Psyr_2475	0.59	-0.3
2,869,843	-		Psyr_2475	0.59	-3.7
2,869,843	-		Psyr_2475	0.59	-0.3
2,870,307	-				-1.6
2,870,436	+				-0.3
2,870,436	+				+1.3
2,870,437	-				+2.0
2,870,437	-				+0.7
2,870,437	-				+0.1
2,870,458	+				+0.4
2,870,478	+				-0.2
2,870,478	+				-0.2
2,870,478	+				-0.9
2,870,478	+				+1.0
2,870,479	-				-2.9
2,870,479	-				-1.6
2,870,504	+				+0.1
2,870,507	+				+0.8
2,871,074	-		Psyr_2476	0.65	-0.6
2,871,074	-		Psyr_2476	0.65	-0.3
2,871,074	-		Psyr_2476	0.65	-1.5
2,871,074	-		Psyr_2476	0.65	+0.2
2,871,149	+		Psyr_2476	0.74	-0.3
2,871,149	+		Psyr_2476	0.74	+0.4
2,871,150	-		Psyr_2476	0.74	-0.7