Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2278

Experiment: KB with Quercetin 360 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Quercetin 360 ug/ml
2,644,704	+		Psyr_2277	0.78	-0.8
2,644,763	-		Psyr_2277	0.82	+0.2
2,644,986	+				-0.8
2,644,987	-				-0.2
2,645,041	+				-0.1
2,645,041	+				+0.1
2,645,042	-				-0.3
2,645,042	-				+0.1
2,645,042	-				-0.9
2,645,043	+				+0.1
2,645,043	+				+0.7
2,645,043	+				+1.2
2,645,043	+				-0.1
2,645,043	+				-1.9
2,645,043	+				-0.3
2,645,043	+				+0.5
2,645,043	+				-0.2
2,645,043	+				+1.7
2,645,043	+				-0.9
2,645,044	-				+0.1
2,645,044	-				-1.0
2,645,044	-				+0.8
2,645,044	-				+0.7
2,645,044	-				+0.7
2,645,044	-				-0.3
2,645,044	-				-0.9
2,645,044	-				-2.1
2,645,272	+				+0.3
2,645,318	-				-0.2
2,645,367	+				+0.7
2,645,494	+				-0.1
2,645,494	+				+1.0
2,645,660	-		Psyr_2278	0.11	-0.1
2,645,702	+		Psyr_2278	0.15	-2.7
2,645,703	-		Psyr_2278	0.15	+0.0
2,645,703	-		Psyr_2278	0.15	-0.9
2,645,703	-		Psyr_2278	0.15	+1.7
2,645,828	-		Psyr_2278	0.27	-1.3
2,646,146	-		Psyr_2278	0.58	-1.6
2,646,169	-		Psyr_2278	0.60	-1.1
2,646,169	-		Psyr_2278	0.60	+2.2
2,646,397	+		Psyr_2278	0.82	-1.1
2,646,434	-		Psyr_2278	0.86	+0.7
2,646,434	-		Psyr_2278	0.86	+0.1
2,646,434	-		Psyr_2278	0.86	-2.7
2,646,588	+				-0.6
2,646,588	+				-0.3
2,646,588	+				-0.7
2,646,588	+				+0.2
2,646,589	-				-0.9
2,646,597	+				-0.3
2,646,646	-				-1.1
2,646,812	-				-1.7
2,646,812	-				+1.3
2,646,813	+				-1.4
2,646,813	+				-0.9
2,646,814	-				+2.7
2,646,814	-				+0.7
2,646,814	-				-0.2
2,646,814	-				+0.5
2,646,862	+		Psyr_2279	0.22	-0.9
2,646,928	+		Psyr_2279	0.42	+0.7
2,646,928	+		Psyr_2279	0.42	+0.7
2,646,928	+		Psyr_2279	0.42	-0.7
2,646,928	+		Psyr_2279	0.42	-0.5
2,646,928	+		Psyr_2279	0.42	-1.8
2,646,929	-		Psyr_2279	0.42	+1.2
2,646,930	+		Psyr_2279	0.42	+0.2
2,646,930	+		Psyr_2279	0.42	+0.4
2,646,930	+		Psyr_2279	0.42	+0.3
2,646,931	-		Psyr_2279	0.43	+1.2
2,646,931	-		Psyr_2279	0.43	+0.2
2,646,931	-		Psyr_2279	0.43	+0.7
2,646,945	+		Psyr_2279	0.47	-0.7
2,646,945	+		Psyr_2279	0.47	-0.8
2,646,945	+		Psyr_2279	0.47	+0.2
2,646,946	-		Psyr_2279	0.47	-0.7
2,646,946	-		Psyr_2279	0.47	-3.6
2,646,946	-		Psyr_2279	0.47	+1.4
2,646,946	-		Psyr_2279	0.47	-1.3
2,647,052	+		Psyr_2279	0.79	+0.1
2,647,194	-				+0.1
2,647,408	+				+0.1
2,647,447	-				+0.7
2,647,546	+				+0.0
2,647,547	-				-1.7
2,647,547	-				+0.5