Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2050

Experiment: KB with Quercetin 360 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Quercetin 360 ug/ml
2,393,602	+		Psyr_2048	0.86	-0.3
2,393,602	+		Psyr_2048	0.86	-0.5
2,393,602	+		Psyr_2048	0.86	+0.6
2,393,765	+				-0.2
2,393,766	-				-1.6
2,393,812	+				-0.6
2,393,812	+				+1.6
2,393,813	-				+0.0
2,393,957	+				+1.9
2,393,957	+				-0.5
2,393,957	+				+0.3
2,393,957	+				+0.2
2,393,957	+				-1.3
2,393,957	+				-1.3
2,393,958	-				-1.5
2,393,958	-				+0.7
2,393,958	-				+0.6
2,394,079	+		Psyr_2049	0.28	+1.0
2,394,079	+		Psyr_2049	0.28	-0.5
2,394,080	-		Psyr_2049	0.28	-0.7
2,394,080	-		Psyr_2049	0.28	-0.3
2,394,458	+				+0.1
2,394,458	+				+2.3
2,394,458	+				+2.6
2,394,459	-				-0.6
2,394,471	+				-1.2
2,394,472	-				-1.0
2,394,472	-				-1.3
2,394,488	+				+0.9
2,394,534	+				-0.7
2,394,534	+				+1.0
2,394,534	+				-1.3
2,394,535	-				+0.2
2,394,535	-				+0.0
2,394,535	-				-2.1
2,394,550	+				-0.5
2,394,557	+				+0.7
2,394,558	-				-1.6
2,394,558	-				-1.6
2,394,692	+				+0.5
2,394,692	+				+0.5
2,394,692	+				-1.7
2,394,692	+				+0.4
2,394,692	+				+0.6
2,394,693	-				-0.2
2,394,693	-				+1.1
2,394,693	-				-1.1
2,394,992	+		Psyr_2050	0.15	-0.5
2,394,993	-		Psyr_2050	0.15	+0.1
2,395,166	+		Psyr_2050	0.22	+1.3
2,395,166	+		Psyr_2050	0.22	+0.4
2,395,166	+		Psyr_2050	0.22	-0.3
2,395,167	-		Psyr_2050	0.22	-0.7
2,395,167	-		Psyr_2050	0.22	+1.3
2,395,167	-		Psyr_2050	0.22	+0.9
2,395,354	+		Psyr_2050	0.29	+1.6
2,396,391	+		Psyr_2050	0.68	-1.7
2,396,391	+		Psyr_2050	0.68	+1.6
2,396,392	-		Psyr_2050	0.68	-1.3
2,396,708	+		Psyr_2050	0.80	+0.7
2,396,708	+		Psyr_2050	0.80	-0.9
2,396,709	-		Psyr_2050	0.80	+0.7
2,396,876	+		Psyr_2050	0.86	+2.0
2,396,877	-		Psyr_2050	0.86	+1.0
2,396,877	-		Psyr_2050	0.86	-0.7
2,396,877	-		Psyr_2050	0.86	+1.0
2,396,877	-		Psyr_2050	0.86	+1.7
2,396,877	-		Psyr_2050	0.86	+1.5
2,396,877	-		Psyr_2050	0.86	+0.0
2,396,965	-		Psyr_2050	0.89	+0.3
2,397,063	-				+1.1
2,397,063	-				+2.5
2,397,063	-				+0.3
2,397,170	-				-0.7
2,397,547	+		Psyr_2051	0.43	+0.9
2,397,547	+		Psyr_2051	0.43	+0.2
2,397,548	-		Psyr_2051	0.43	-0.0
2,397,725	-		Psyr_2051	0.69	-1.1
2,397,792	+		Psyr_2051	0.79	-0.9
2,397,793	-		Psyr_2051	0.79	+0.9
2,397,826	+		Psyr_2051	0.84	+0.7
2,397,826	+		Psyr_2051	0.84	+0.3
2,397,826	+		Psyr_2051	0.84	-0.2
2,397,911	+				+0.3
2,397,911	+				-0.4
2,397,912	-				+1.5
2,397,937	+				-0.9
2,397,937	+				-1.0
2,397,938	-				-0.5
2,398,026	+				-2.1
2,398,070	+		Psyr_2052	0.12	+1.1
2,398,070	+		Psyr_2052	0.12	+0.6
2,398,190	-		Psyr_2052	0.55	+0.2
2,398,190	-		Psyr_2052	0.55	+0.4