Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1400

Experiment: KB with Quercetin 360 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Quercetin 360 ug/ml
1,586,517	-				-1.1
1,586,598	+				-0.6
1,586,598	+				-0.8
1,586,598	+				+0.4
1,586,598	+				+0.5
1,586,598	+				-0.5
1,586,598	+				+0.2
1,586,599	-				+0.4
1,586,599	-				-1.2
1,586,599	-				-1.2
1,586,599	-				-2.2
1,586,599	-				+0.1
1,586,599	-				-0.8
1,586,602	-				-1.5
1,586,622	+				-1.0
1,586,623	-				-0.8
1,586,753	+				-1.9
1,586,753	+				-0.2
1,586,753	+				+1.2
1,586,754	-				+1.4
1,586,754	-				+0.3
1,586,757	+		Psyr_1400	0.10	-1.6
1,586,757	+		Psyr_1400	0.10	+0.1
1,586,757	+		Psyr_1400	0.10	-0.2
1,586,757	+		Psyr_1400	0.10	+0.8
1,586,757	+		Psyr_1400	0.10	-1.2
1,586,757	+		Psyr_1400	0.10	-0.1
1,586,757	+		Psyr_1400	0.10	-2.1
1,586,757	+		Psyr_1400	0.10	+0.0
1,586,758	-		Psyr_1400	0.10	+0.3
1,586,758	-		Psyr_1400	0.10	+0.6
1,586,758	-		Psyr_1400	0.10	+0.1
1,586,758	-		Psyr_1400	0.10	-2.6
1,586,758	-		Psyr_1400	0.10	+0.4
1,586,758	-		Psyr_1400	0.10	-0.7
1,586,758	-		Psyr_1400	0.10	-1.3
1,586,875	+		Psyr_1400	0.19	+0.4
1,587,029	-		Psyr_1400	0.30	-0.2
1,587,029	-		Psyr_1400	0.30	-0.8
1,587,048	+		Psyr_1400	0.32	-2.2
1,587,049	-		Psyr_1400	0.32	-1.2
1,587,117	+		Psyr_1400	0.37	-1.1
1,587,117	+		Psyr_1400	0.37	-1.1
1,587,118	-		Psyr_1400	0.37	+0.0
1,587,190	-		Psyr_1400	0.42	+0.4
1,587,240	+		Psyr_1400	0.46	-1.5
1,587,240	+		Psyr_1400	0.46	-0.6
1,587,240	+		Psyr_1400	0.46	-0.7
1,587,240	+		Psyr_1400	0.46	-1.6
1,587,240	+		Psyr_1400	0.46	-0.7
1,587,240	+		Psyr_1400	0.46	+0.4
1,587,240	+		Psyr_1400	0.46	-0.8
1,587,240	+		Psyr_1400	0.46	-0.7
1,587,240	+		Psyr_1400	0.46	+0.1
1,587,240	+		Psyr_1400	0.46	-0.8
1,587,240	+		Psyr_1400	0.46	+0.8
1,587,240	+		Psyr_1400	0.46	-3.6
1,587,240	+		Psyr_1400	0.46	-0.0
1,587,240	+		Psyr_1400	0.46	-1.4
1,587,241	-		Psyr_1400	0.46	-1.2
1,587,241	-		Psyr_1400	0.46	-1.0
1,587,241	-		Psyr_1400	0.46	+0.2
1,587,241	-		Psyr_1400	0.46	-0.4
1,587,241	-		Psyr_1400	0.46	-0.7
1,587,241	-		Psyr_1400	0.46	+0.2
1,587,241	-		Psyr_1400	0.46	-0.0
1,587,241	-		Psyr_1400	0.46	-0.8
1,587,241	-		Psyr_1400	0.46	-0.1
1,587,255	+		Psyr_1400	0.47	-1.2
1,587,258	+		Psyr_1400	0.47	-2.7
1,587,259	-		Psyr_1400	0.47	+0.5
1,587,259	-		Psyr_1400	0.47	+0.3
1,587,259	-		Psyr_1400	0.47	-2.0
1,587,259	-		Psyr_1400	0.47	-0.8
1,587,259	-		Psyr_1400	0.47	+1.5
1,587,291	+		Psyr_1400	0.50	+0.4
1,587,292	-		Psyr_1400	0.50	-0.2
1,587,292	-		Psyr_1400	0.50	+1.1
1,587,316	+		Psyr_1400	0.52	-2.0
1,587,316	+		Psyr_1400	0.52	-1.7
1,587,316	+		Psyr_1400	0.52	-0.9
1,587,316	+		Psyr_1400	0.52	-0.3
1,587,317	-		Psyr_1400	0.52	-1.6
1,587,317	-		Psyr_1400	0.52	-0.8
1,587,317	-		Psyr_1400	0.52	+1.3
1,587,324	+		Psyr_1400	0.52	-0.7
1,587,324	+		Psyr_1400	0.52	-0.8
1,587,324	+		Psyr_1400	0.52	-0.5
1,587,324	+		Psyr_1400	0.52	-2.7
1,587,324	+		Psyr_1400	0.52	+0.8
1,587,325	-		Psyr_1400	0.52	-0.2
1,587,325	-		Psyr_1400	0.52	-1.1
1,587,369	+		Psyr_1400	0.56	+0.8
1,587,369	+		Psyr_1400	0.56	+2.8
1,587,369	+		Psyr_1400	0.56	-1.5
1,587,369	+		Psyr_1400	0.56	-1.3
1,587,369	+		Psyr_1400	0.56	-0.9
1,587,369	+		Psyr_1400	0.56	-0.0
1,587,369	+		Psyr_1400	0.56	-1.9
1,587,369	+		Psyr_1400	0.56	-1.2
1,587,370	-		Psyr_1400	0.56	-1.0
1,587,370	-		Psyr_1400	0.56	-0.2
1,587,370	-		Psyr_1400	0.56	-0.5
1,587,370	-		Psyr_1400	0.56	+0.5
1,587,370	-		Psyr_1400	0.56	+1.3
1,587,370	-		Psyr_1400	0.56	-1.7
1,587,370	-		Psyr_1400	0.56	-1.4
1,587,370	-		Psyr_1400	0.56	-0.3
1,587,370	-		Psyr_1400	0.56	-0.2
1,587,370	-		Psyr_1400	0.56	-1.1
1,587,391	+		Psyr_1400	0.57	+1.4
1,587,392	-		Psyr_1400	0.57	-0.2
1,587,392	-		Psyr_1400	0.57	-0.9
1,587,423	+		Psyr_1400	0.60	+2.4
1,587,423	+		Psyr_1400	0.60	-1.6
1,587,423	+		Psyr_1400	0.60	-0.4
1,587,423	+		Psyr_1400	0.60	+0.6
1,587,424	-		Psyr_1400	0.60	-1.8
1,587,424	-		Psyr_1400	0.60	+0.8
1,587,424	-		Psyr_1400	0.60	+1.0
1,587,424	-		Psyr_1400	0.60	-1.7
1,587,424	-		Psyr_1400	0.60	-1.0
1,587,464	-		Psyr_1400	0.63	+0.1
1,587,497	+		Psyr_1400	0.65	-0.7
1,587,498	-		Psyr_1400	0.65	-0.1
1,587,574	+		Psyr_1400	0.71	-2.4
1,587,574	+		Psyr_1400	0.71	-0.6
1,587,574	+		Psyr_1400	0.71	+1.2
1,587,575	-		Psyr_1400	0.71	-1.9
1,587,575	-		Psyr_1400	0.71	-1.4
1,587,585	-		Psyr_1400	0.72	-1.2
1,587,660	+		Psyr_1400	0.77	-2.5
1,587,660	+		Psyr_1400	0.77	+0.1
1,587,660	+		Psyr_1400	0.77	-3.1
1,587,661	-		Psyr_1400	0.77	+0.8
1,587,661	-		Psyr_1400	0.77	-2.9
1,587,661	-		Psyr_1400	0.77	-0.5
1,587,722	-		Psyr_1400	0.82	-0.8
1,587,760	+		Psyr_1400	0.85	-1.7
1,587,761	-		Psyr_1400	0.85	-0.8
1,587,761	-		Psyr_1400	0.85	-0.8
1,587,788	-		Psyr_1400	0.87	-1.3
1,587,788	-		Psyr_1400	0.87	+0.8
1,587,817	-		Psyr_1400	0.89	-0.7
1,587,817	-		Psyr_1400	0.89	-0.9
1,587,817	-		Psyr_1400	0.89	-2.2
1,587,819	+		Psyr_1400	0.89	-0.8
1,587,820	-		Psyr_1400	0.89	+0.7
1,587,820	-		Psyr_1400	0.89	-1.4
1,587,820	-		Psyr_1400	0.89	+0.3
1,587,820	-		Psyr_1400	0.89	+0.1
1,587,987	-				+0.2
1,588,019	+				-0.3
1,588,056	+				-0.6
1,588,056	+				-1.4
1,588,056	+				-2.2
1,588,056	+				-1.4
1,588,056	+				-2.4
1,588,056	+				-1.2
1,588,056	+				+2.4
1,588,056	+				-0.6
1,588,056	+				-0.1
1,588,056	+				-1.2
1,588,056	+				-2.6
1,588,057	-				+0.5
1,588,057	-				+0.3
1,588,057	-				+0.1
1,588,057	-				-0.2
1,588,057	-				-0.6
1,588,057	-				+1.2
1,588,057	-				-0.5
1,588,057	-				+0.7
1,588,057	-				-2.0
1,588,057	-				+3.6
1,588,079	+				+0.1
1,588,081	+				-0.5
1,588,081	+				+2.1
1,588,081	+				-2.0
1,588,081	+				+0.0
1,588,081	+				-1.3
1,588,081	+				-0.9
1,588,082	-				+2.0
1,588,082	-				+1.0
1,588,082	-				-0.8
1,588,082	-				-0.6
1,588,082	-				-0.1
1,588,082	-				+0.6
1,588,082	-				-0.1
1,588,082	-				+0.6
1,588,085	+				-1.5
1,588,085	+				+0.4
1,588,085	+				+0.7
1,588,085	+				-1.1
1,588,085	+				-1.0
1,588,085	+				-0.8
1,588,086	-				+1.3
1,588,086	-				+0.6
1,588,086	-				+1.3
1,588,093	+				-0.3
1,588,128	+				-0.5
1,588,136	-				-0.1
1,588,258	+				-0.6
1,588,259	-				+1.2
1,588,267	+				-0.5
1,588,346	+				-0.9
1,588,350	+				-0.9
1,588,597	+				-0.7
1,588,597	+				+0.0
1,588,597	+				-0.5
1,588,597	+				-1.7
1,588,598	-				+0.8
1,588,598	-				+0.1
1,588,616	+				+0.1
1,588,616	+				-1.8
1,588,616	+				-0.6
1,588,616	+				+1.2
1,588,616	+				+1.4
1,588,617	-				+0.7
1,588,617	-				+0.8
1,588,718	+				-0.4
1,588,718	+				-0.8
1,588,718	+				-0.3
1,588,718	+				-1.7
1,588,718	+				-0.7
1,588,718	+				+0.0
1,588,718	+				+0.1
1,588,718	+				+0.7
1,588,718	+				-0.1
1,588,719	-				+0.5
1,588,719	-				+0.5
1,588,719	-				-1.1
1,588,719	-				+1.0
1,588,741	+				-1.2
1,588,750	+				+0.8
1,588,808	+				+1.0
1,588,808	+				+0.4
1,588,808	+				+2.8
1,588,809	-				-0.4
1,588,818	-				+0.4
1,588,818	-				-1.4
1,588,884	+				-0.0
1,588,884	+				+0.4
1,588,884	+				+2.1
1,588,885	-				-0.2
1,588,887	+				-1.3
1,588,958	+				-1.3