Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0790

Experiment: KB with Quercetin 360 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Quercetin 360 ug/ml
896,626	+				-1.0
896,626	+				+1.6
896,626	+				+0.3
896,626	+				+0.7
896,626	+				+0.8
896,631	+				+1.3
896,631	+				-1.1
896,631	+				+1.8
896,631	+				+0.2
896,631	+				+0.2
896,632	-				+0.8
896,632	-				-1.0
896,632	-				+0.1
896,677	+				+1.4
896,677	+				+0.6
896,678	-				-0.4
896,678	-				-0.4
896,693	+				+1.5
896,771	+				-0.4
896,933	-				+0.7
897,147	+				+0.4
897,201	+				+0.2
897,201	+				-1.2
897,279	+				+1.4
897,315	+				-0.2
897,315	+				+1.7
897,315	+				-1.2
897,315	+				+0.5
897,315	+				-0.3
897,316	-				-1.0
897,316	-				+1.0
897,316	-				+1.4
897,316	-				-0.2
897,316	-				+1.6
897,316	-				-2.1
897,316	-				-1.0
897,426	+		Psyr_0790	0.17	+0.3
897,426	+		Psyr_0790	0.17	+0.7
897,426	+		Psyr_0790	0.17	-1.5
897,426	+		Psyr_0790	0.17	+0.8
897,426	+		Psyr_0790	0.17	+0.4
897,426	+		Psyr_0790	0.17	+1.3
897,426	+		Psyr_0790	0.17	+3.2
897,426	+		Psyr_0790	0.17	+0.2
897,426	+		Psyr_0790	0.17	-2.3
897,426	+		Psyr_0790	0.17	-0.1
897,426	+		Psyr_0790	0.17	-0.7
897,427	-		Psyr_0790	0.17	+0.7
897,427	-		Psyr_0790	0.17	+0.2
897,427	-		Psyr_0790	0.17	-0.6
897,427	-		Psyr_0790	0.17	+0.2
897,427	-		Psyr_0790	0.17	-0.7
897,427	-		Psyr_0790	0.17	+1.6
897,427	-		Psyr_0790	0.17	+0.7
897,427	-		Psyr_0790	0.17	-1.8
897,427	-		Psyr_0790	0.17	+0.7
897,427	-		Psyr_0790	0.17	-1.2
897,427	-		Psyr_0790	0.17	+1.8
897,432	+		Psyr_0790	0.18	+0.6
897,432	+		Psyr_0790	0.18	+1.4
897,432	+		Psyr_0790	0.18	-1.0
897,432	+		Psyr_0790	0.18	-0.2
897,432	+		Psyr_0790	0.18	-0.7
897,433	-		Psyr_0790	0.18	+0.8
897,433	-		Psyr_0790	0.18	+1.2
897,578	-		Psyr_0790	0.29	+0.7
897,679	+		Psyr_0790	0.37	-0.0
897,680	-		Psyr_0790	0.37	+1.5
897,909	+		Psyr_0790	0.55	+0.3
898,035	+		Psyr_0790	0.64	+1.6
898,035	+		Psyr_0790	0.64	+1.1
898,305	+		Psyr_0790	0.85	+0.0
898,305	+		Psyr_0790	0.85	-0.4
898,305	+		Psyr_0790	0.85	+1.0
898,305	+		Psyr_0790	0.85	+1.3
898,306	-		Psyr_0790	0.85	-0.2
898,306	-		Psyr_0790	0.85	+0.7
898,306	-		Psyr_0790	0.85	-1.5
898,306	-		Psyr_0790	0.85	-0.1
898,306	-		Psyr_0790	0.85	-1.3
898,306	-		Psyr_0790	0.85	+0.8
898,323	+		Psyr_0790	0.86	+2.2
898,324	-		Psyr_0790	0.87	+1.1
898,324	-		Psyr_0790	0.87	-0.3
898,372	+				-0.2
898,372	+				+2.4
898,373	-				-0.6
898,373	-				+1.1
898,480	+				+0.0
898,486	+				-2.3
898,486	+				-0.2
898,487	-				+0.1
898,487	-				-1.1
898,487	-				-0.0
898,487	-				+1.0
898,505	+				+0.8
898,506	-				-1.8
898,565	+				-1.4
898,565	+				+0.1
898,584	-				-0.5
898,655	+				+0.4
898,656	-				-0.2
898,656	-				+0.5
898,704	+				+3.6
898,805	+		Psyr_0791	0.17	+0.2
898,806	-		Psyr_0791	0.17	-0.2
899,248	+				-1.4
899,248	+				+1.7
899,248	+				-0.5
899,248	+				+0.1
899,249	-				-0.7
899,249	-				-0.2
899,384	+		Psyr_0792	0.22	-1.0
899,385	-		Psyr_0792	0.22	-1.3