Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27345

Experiment: RCH2_defined_glucose with 2,2'-Dipyridyl 400 uM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27340 and BWI76_RS27345 overlap by 11 nucleotidesBWI76_RS27345 and BWI76_RS27350 are separated by 4 nucleotidesBWI76_RS27350 and BWI76_RS27355 are separated by 198 nucleotides BWI76_RS27340: BWI76_RS27340 - hypothetical protein, at 5,675,405 to 5,676,778 _RS27340 BWI76_RS27345: BWI76_RS27345 - hypothetical protein, at 5,676,768 to 5,677,493 _RS27345 BWI76_RS27350: BWI76_RS27350 - hypothetical protein, at 5,677,498 to 5,678,175 _RS27350 BWI76_RS27355: BWI76_RS27355 - 50S ribosomal protein L33, at 5,678,374 to 5,678,541 _RS27355 Position (kb) 5676 5677 5678Strain fitness (log2 ratio) -1 0 1at 5675.891 kb on + strandat 5676.075 kb on + strand, within BWI76_RS27340at 5676.077 kb on + strand, within BWI76_RS27340at 5676.266 kb on - strand, within BWI76_RS27340at 5676.405 kb on + strand, within BWI76_RS27340at 5676.441 kb on + strand, within BWI76_RS27340at 5676.459 kb on - strand, within BWI76_RS27340at 5676.459 kb on - strand, within BWI76_RS27340at 5676.513 kb on + strand, within BWI76_RS27340at 5676.600 kb on + strand, within BWI76_RS27340at 5676.602 kb on - strand, within BWI76_RS27340at 5676.616 kb on + strand, within BWI76_RS27340at 5676.785 kb on + strandat 5676.880 kb on - strand, within BWI76_RS27345at 5676.929 kb on - strand, within BWI76_RS27345at 5676.941 kb on + strand, within BWI76_RS27345at 5676.941 kb on + strand, within BWI76_RS27345at 5676.981 kb on - strand, within BWI76_RS27345at 5677.039 kb on - strand, within BWI76_RS27345at 5677.145 kb on + strand, within BWI76_RS27345at 5677.249 kb on + strand, within BWI76_RS27345at 5677.255 kb on - strand, within BWI76_RS27345at 5677.324 kb on - strand, within BWI76_RS27345at 5677.369 kb on - strand, within BWI76_RS27345at 5677.553 kb on + strandat 5677.627 kb on - strand, within BWI76_RS27350at 5677.627 kb on - strand, within BWI76_RS27350at 5677.660 kb on - strand, within BWI76_RS27350at 5677.739 kb on - strand, within BWI76_RS27350at 5677.749 kb on - strand, within BWI76_RS27350at 5677.826 kb on + strand, within BWI76_RS27350at 5677.890 kb on + strand, within BWI76_RS27350at 5677.964 kb on - strand, within BWI76_RS27350at 5678.120 kb on + strandat 5678.121 kb on - strandat 5678.130 kb on + strandat 5678.321 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_glucose with 2,2'-Dipyridyl 400 uM
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5,675,891 + -0.8
5,676,075 + BWI76_RS27340 0.49 -0.5
5,676,077 + BWI76_RS27340 0.49 +0.0
5,676,266 - BWI76_RS27340 0.63 +0.5
5,676,405 + BWI76_RS27340 0.73 +0.3
5,676,441 + BWI76_RS27340 0.75 -0.1
5,676,459 - BWI76_RS27340 0.77 +1.0
5,676,459 - BWI76_RS27340 0.77 -0.7
5,676,513 + BWI76_RS27340 0.81 -0.2
5,676,600 + BWI76_RS27340 0.87 +0.1
5,676,602 - BWI76_RS27340 0.87 -0.3
5,676,616 + BWI76_RS27340 0.88 -0.1
5,676,785 + +0.1
5,676,880 - BWI76_RS27345 0.15 +0.5
5,676,929 - BWI76_RS27345 0.22 +0.2
5,676,941 + BWI76_RS27345 0.24 +0.1
5,676,941 + BWI76_RS27345 0.24 +0.2
5,676,981 - BWI76_RS27345 0.29 +1.3
5,677,039 - BWI76_RS27345 0.37 +0.3
5,677,145 + BWI76_RS27345 0.52 -0.9
5,677,249 + BWI76_RS27345 0.66 +1.1
5,677,255 - BWI76_RS27345 0.67 -0.4
5,677,324 - BWI76_RS27345 0.77 -0.2
5,677,369 - BWI76_RS27345 0.83 +0.2
5,677,553 + -0.3
5,677,627 - BWI76_RS27350 0.19 +0.4
5,677,627 - BWI76_RS27350 0.19 -1.2
5,677,660 - BWI76_RS27350 0.24 -0.6
5,677,739 - BWI76_RS27350 0.36 +0.2
5,677,749 - BWI76_RS27350 0.37 +0.2
5,677,826 + BWI76_RS27350 0.48 +0.5
5,677,890 + BWI76_RS27350 0.58 +0.4
5,677,964 - BWI76_RS27350 0.69 -0.9
5,678,120 + -0.3
5,678,121 - +0.4
5,678,130 + +0.1
5,678,321 - +0.1

Or see this region's nucleotide sequence