Experiment: RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE53_003589 and ABIE53_003590 are separated by 228 nucleotides ABIE53_003590 and ABIE53_003591 are separated by 25 nucleotides ABIE53_003591 and ABIE53_003592 are separated by 159 nucleotides
ABIE53_003589: ABIE53_003589 - GTP-binding protein, at 4,030,366 to 4,031,487
_003589
ABIE53_003590: ABIE53_003590 - large subunit ribosomal protein L27, at 4,031,716 to 4,031,979
_003590
ABIE53_003591: ABIE53_003591 - large subunit ribosomal protein L21, at 4,032,005 to 4,032,406
_003591
ABIE53_003592: ABIE53_003592 - octaprenyl-diphosphate synthase, at 4,032,566 to 4,033,558
_003592
Position (kb)
4032
4033 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4031.492 kb on - strand at 4031.492 kb on - strand at 4031.492 kb on - strand at 4031.510 kb on - strand at 4031.510 kb on - strand at 4031.510 kb on - strand at 4031.510 kb on - strand at 4031.510 kb on - strand at 4031.510 kb on - strand at 4031.510 kb on - strand at 4031.548 kb on - strand at 4031.558 kb on - strand at 4031.558 kb on - strand at 4031.558 kb on - strand at 4031.558 kb on - strand at 4031.558 kb on - strand at 4031.558 kb on - strand at 4031.558 kb on - strand at 4031.558 kb on - strand at 4031.564 kb on - strand at 4031.564 kb on - strand at 4031.564 kb on - strand at 4031.564 kb on - strand at 4031.564 kb on - strand at 4031.564 kb on - strand at 4031.564 kb on - strand at 4031.609 kb on - strand at 4031.609 kb on - strand at 4031.609 kb on - strand at 4031.609 kb on - strand at 4031.609 kb on - strand at 4031.609 kb on - strand at 4031.609 kb on - strand at 4031.609 kb on - strand at 4031.653 kb on - strand at 4031.653 kb on - strand at 4031.653 kb on - strand at 4031.668 kb on - strand at 4032.376 kb on - strand at 4032.376 kb on - strand at 4032.376 kb on - strand at 4032.376 kb on - strand at 4032.376 kb on - strand at 4032.380 kb on - strand at 4032.380 kb on - strand at 4032.380 kb on - strand at 4032.380 kb on - strand at 4032.380 kb on - strand at 4032.380 kb on - strand at 4032.485 kb on - strand at 4032.534 kb on + strand at 4032.534 kb on + strand at 4032.535 kb on - strand at 4032.535 kb on - strand at 4032.535 kb on - strand at 4032.536 kb on + strand at 4032.536 kb on + strand at 4032.536 kb on + strand at 4032.536 kb on + strand at 4032.536 kb on + strand at 4032.536 kb on + strand at 4032.536 kb on + strand at 4032.536 kb on + strand at 4032.536 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM remove 4,031,492 - +1.7 4,031,492 - -1.0 4,031,492 - +3.5 4,031,510 - -0.3 4,031,510 - -0.6 4,031,510 - +1.2 4,031,510 - +0.2 4,031,510 - -0.9 4,031,510 - -0.1 4,031,510 - -0.4 4,031,548 - -1.8 4,031,558 - +0.5 4,031,558 - -0.9 4,031,558 - -0.3 4,031,558 - +0.8 4,031,558 - +2.9 4,031,558 - +1.7 4,031,558 - +0.6 4,031,558 - +0.1 4,031,564 - -0.7 4,031,564 - -1.8 4,031,564 - +2.3 4,031,564 - -0.7 4,031,564 - -0.1 4,031,564 - -0.7 4,031,564 - +0.7 4,031,609 - +0.0 4,031,609 - +0.9 4,031,609 - +0.3 4,031,609 - +0.1 4,031,609 - +1.6 4,031,609 - -0.3 4,031,609 - -2.0 4,031,609 - -1.2 4,031,653 - -1.5 4,031,653 - -0.2 4,031,653 - -1.3 4,031,668 - +1.3 4,032,376 - -0.4 4,032,376 - -1.8 4,032,376 - -0.4 4,032,376 - -0.7 4,032,376 - -0.9 4,032,380 - -0.7 4,032,380 - +1.3 4,032,380 - -0.7 4,032,380 - -0.4 4,032,380 - -1.1 4,032,380 - +0.9 4,032,485 - +1.3 4,032,534 + -1.7 4,032,534 + -1.5 4,032,535 - +0.3 4,032,535 - -0.4 4,032,535 - +0.2 4,032,536 + -0.6 4,032,536 + +3.5 4,032,536 + -0.1 4,032,536 + -0.1 4,032,536 + -0.1 4,032,536 + -0.6 4,032,536 + -2.3 4,032,536 + -0.6 4,032,536 + -1.7
Or see this region's nucleotide sequence