Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1154

Experiment: Varel_Bryant_medium_Glucose with Deoxycholic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Deoxycholic 0.1 mg/ml
1,438,741	+		BT1153	0.65	-1.4
1,438,741	+		BT1153	0.65	-1.4
1,438,742	-		BT1153	0.65	-2.7
1,438,742	-		BT1153	0.65	-1.8
1,438,742	-		BT1153	0.65	-1.9
1,438,743	+		BT1153	0.65	-4.0
1,438,744	-		BT1153	0.65	-5.2
1,438,885	+		BT1153	0.79	-1.6
1,438,889	-		BT1153	0.79	-0.8
1,439,042	-				-4.1
1,439,263	+				-0.4
1,439,284	+				-1.5
1,439,574	-				-0.8
1,439,576	+				-0.8
1,439,901	+		BT1154	0.16	-1.0
1,439,903	+		BT1154	0.16	-1.4
1,439,905	+		BT1154	0.16	-1.0
1,439,908	-		BT1154	0.16	-0.0
1,440,114	+		BT1154	0.32	-1.4
1,440,188	+		BT1154	0.37	-1.8
1,440,730	+		BT1154	0.78	-1.6
1,440,872	-		BT1154	0.89	-1.4
1,441,131	+				-3.9